Coexpression cluster: Cluster_183 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 13.89% (10/72) 6.74 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 13.89% (10/72) 6.74 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 13.89% (10/72) 6.74 0.0 0.0
GO:0043039 tRNA aminoacylation 13.89% (10/72) 6.74 0.0 0.0
GO:0016874 ligase activity 16.67% (12/72) 5.84 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 16.67% (12/72) 5.45 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 12.5% (9/72) 6.7 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 13.89% (10/72) 6.14 0.0 0.0
GO:0006399 tRNA metabolic process 13.89% (10/72) 6.07 0.0 0.0
GO:0016070 RNA metabolic process 19.44% (14/72) 4.52 0.0 0.0
GO:0006520 amino acid metabolic process 15.28% (11/72) 5.41 0.0 0.0
GO:0034660 ncRNA metabolic process 13.89% (10/72) 5.69 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 16.67% (12/72) 4.89 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 31.94% (23/72) 2.92 0.0 0.0
GO:0032555 purine ribonucleotide binding 31.94% (23/72) 2.83 0.0 0.0
GO:0097367 carbohydrate derivative binding 31.94% (23/72) 2.81 0.0 0.0
GO:1901363 heterocyclic compound binding 44.44% (32/72) 2.15 0.0 0.0
GO:0097159 organic cyclic compound binding 44.44% (32/72) 2.15 0.0 0.0
GO:0032553 ribonucleotide binding 31.94% (23/72) 2.82 0.0 0.0
GO:0046483 heterocycle metabolic process 22.22% (16/72) 3.69 0.0 0.0
GO:0090304 nucleic acid metabolic process 19.44% (14/72) 4.08 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 22.22% (16/72) 3.69 0.0 0.0
GO:0017076 purine nucleotide binding 31.94% (23/72) 2.76 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 22.22% (16/72) 3.64 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 20.83% (15/72) 3.78 0.0 0.0
GO:0000166 nucleotide binding 31.94% (23/72) 2.7 0.0 0.0
GO:1901265 nucleoside phosphate binding 31.94% (23/72) 2.7 0.0 0.0
GO:0043168 anion binding 31.94% (23/72) 2.69 0.0 0.0
GO:0036094 small molecule binding 31.94% (23/72) 2.64 0.0 0.0
GO:0019752 carboxylic acid metabolic process 15.28% (11/72) 4.53 0.0 0.0
GO:0043436 oxoacid metabolic process 15.28% (11/72) 4.53 0.0 0.0
GO:0006082 organic acid metabolic process 15.28% (11/72) 4.53 0.0 0.0
GO:0005488 binding 51.39% (37/72) 1.66 0.0 0.0
GO:0005524 ATP binding 26.39% (19/72) 2.82 0.0 0.0
GO:0044281 small molecule metabolic process 16.67% (12/72) 3.99 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.22% (16/72) 3.18 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 26.39% (19/72) 2.73 0.0 0.0
GO:0030554 adenyl nucleotide binding 26.39% (19/72) 2.65 0.0 0.0
GO:0043167 ion binding 31.94% (23/72) 2.06 0.0 0.0
GO:0003674 molecular_function 59.72% (43/72) 1.09 0.0 0.0
GO:0044237 cellular metabolic process 27.78% (20/72) 1.99 0.0 0.0
GO:0003676 nucleic acid binding 22.22% (16/72) 2.35 0.0 0.0
GO:0009987 cellular process 31.94% (23/72) 1.62 1e-06 2e-06
GO:0006807 nitrogen compound metabolic process 25.0% (18/72) 1.83 2e-06 8e-06
GO:0043170 macromolecule metabolic process 23.61% (17/72) 1.88 2e-06 1e-05
GO:0008152 metabolic process 29.17% (21/72) 1.6 3e-06 1.1e-05
GO:0071704 organic substance metabolic process 27.78% (20/72) 1.63 3e-06 1.4e-05
GO:0003824 catalytic activity 33.33% (24/72) 1.21 4.1e-05 0.000164
GO:1901564 organonitrogen compound metabolic process 19.44% (14/72) 1.7 7.9e-05 0.000312
GO:0044238 primary metabolic process 23.61% (17/72) 1.46 0.000102 0.000392
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.94% (5/72) 3.39 0.000121 0.000458
GO:0003924 GTPase activity 5.56% (4/72) 3.86 0.000173 0.000642
GO:0016462 pyrophosphatase activity 6.94% (5/72) 3.25 0.000187 0.00068
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.94% (5/72) 3.2 0.000223 0.000798
GO:0006414 translational elongation 2.78% (2/72) 6.47 0.000228 0.0008
GO:0016817 hydrolase activity, acting on acid anhydrides 6.94% (5/72) 3.17 0.00024 0.000828
GO:0008150 biological_process 33.33% (24/72) 1.02 0.000354 0.001177
GO:0003746 translation elongation factor activity 2.78% (2/72) 6.17 0.000349 0.001183
GO:0005525 GTP binding 5.56% (4/72) 3.49 0.000463 0.001488
GO:0032561 guanyl ribonucleotide binding 5.56% (4/72) 3.49 0.000463 0.001488
GO:0019001 guanyl nucleotide binding 5.56% (4/72) 3.46 0.000497 0.001574
GO:0009058 biosynthetic process 9.72% (7/72) 2.09 0.001283 0.003995
GO:0003723 RNA binding 5.56% (4/72) 3.07 0.001372 0.004202
GO:0016879 ligase activity, forming carbon-nitrogen bonds 2.78% (2/72) 5.04 0.001696 0.005114
GO:0044249 cellular biosynthetic process 8.33% (6/72) 2.11 0.002685 0.007972
GO:0004832 valine-tRNA ligase activity 1.39% (1/72) 8.17 0.003461 0.009822
GO:0005049 nuclear export signal receptor activity 1.39% (1/72) 8.17 0.003461 0.009822
GO:0006438 valyl-tRNA aminoacylation 1.39% (1/72) 8.17 0.003461 0.009822
GO:1901576 organic substance biosynthetic process 8.33% (6/72) 2.01 0.003822 0.010691
GO:0006433 prolyl-tRNA aminoacylation 1.39% (1/72) 7.59 0.005186 0.013527
GO:0004827 proline-tRNA ligase activity 1.39% (1/72) 7.59 0.005186 0.013527
GO:0046654 tetrahydrofolate biosynthetic process 1.39% (1/72) 7.59 0.005186 0.013527
GO:0004146 dihydrofolate reductase activity 1.39% (1/72) 7.59 0.005186 0.013527
GO:0046653 tetrahydrofolate metabolic process 1.39% (1/72) 7.59 0.005186 0.013527
GO:0045182 translation regulator activity 2.78% (2/72) 4.11 0.00608 0.015045
GO:0090079 translation regulator activity, nucleic acid binding 2.78% (2/72) 4.11 0.00608 0.015045
GO:0008135 translation factor activity, RNA binding 2.78% (2/72) 4.11 0.00608 0.015045
GO:0005737 cytoplasm 2.78% (2/72) 4.09 0.006258 0.015288
GO:0008168 methyltransferase activity 4.17% (3/72) 3.03 0.00602 0.015492
GO:0004813 alanine-tRNA ligase activity 1.39% (1/72) 7.17 0.006909 0.016262
GO:0006419 alanyl-tRNA aminoacylation 1.39% (1/72) 7.17 0.006909 0.016262
GO:0009396 folic acid-containing compound biosynthetic process 1.39% (1/72) 7.17 0.006909 0.016262
GO:0016741 transferase activity, transferring one-carbon groups 4.17% (3/72) 2.94 0.007089 0.016483
GO:0019438 aromatic compound biosynthetic process 4.17% (3/72) 2.92 0.007439 0.017091
GO:0018130 heterocycle biosynthetic process 4.17% (3/72) 2.91 0.007617 0.017296
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.39% (1/72) 6.85 0.008629 0.018505
GO:0006760 folic acid-containing compound metabolic process 1.39% (1/72) 6.85 0.008629 0.018505
GO:0042559 pteridine-containing compound biosynthetic process 1.39% (1/72) 6.85 0.008629 0.018505
GO:0006528 asparagine metabolic process 1.39% (1/72) 6.85 0.008629 0.018505
GO:0006529 asparagine biosynthetic process 1.39% (1/72) 6.85 0.008629 0.018505
GO:0042558 pteridine-containing compound metabolic process 1.39% (1/72) 6.59 0.010346 0.021943
GO:1901362 organic cyclic compound biosynthetic process 4.17% (3/72) 2.71 0.01105 0.02318
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.39% (1/72) 6.37 0.01206 0.025029
GO:0016779 nucleotidyltransferase activity 2.78% (2/72) 3.53 0.013122 0.026942
GO:0000049 tRNA binding 1.39% (1/72) 6.17 0.013772 0.027687
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.39% (1/72) 6.17 0.013772 0.027687
GO:0006220 pyrimidine nucleotide metabolic process 1.39% (1/72) 6.0 0.01548 0.029876
GO:0006221 pyrimidine nucleotide biosynthetic process 1.39% (1/72) 6.0 0.01548 0.029876
GO:0140142 nucleocytoplasmic carrier activity 1.39% (1/72) 6.0 0.01548 0.029876
GO:0003883 CTP synthase activity 1.39% (1/72) 6.0 0.01548 0.029876
GO:0031625 ubiquitin protein ligase binding 1.39% (1/72) 5.85 0.017185 0.032517
GO:0044389 ubiquitin-like protein ligase binding 1.39% (1/72) 5.85 0.017185 0.032517
GO:0009067 aspartate family amino acid biosynthetic process 1.39% (1/72) 5.59 0.020587 0.038205
GO:0005643 nuclear pore 1.39% (1/72) 5.59 0.020587 0.038205
GO:0006886 intracellular protein transport 2.78% (2/72) 3.16 0.021195 0.038958
GO:0009066 aspartate family amino acid metabolic process 1.39% (1/72) 5.37 0.023977 0.043657
GO:0042254 ribosome biogenesis 1.39% (1/72) 5.27 0.025668 0.045036
GO:0072528 pyrimidine-containing compound biosynthetic process 1.39% (1/72) 5.27 0.025668 0.045036
GO:0140104 molecular carrier activity 1.39% (1/72) 5.27 0.025668 0.045036
GO:0009982 pseudouridine synthase activity 1.39% (1/72) 5.27 0.025668 0.045036
GO:0072527 pyrimidine-containing compound metabolic process 1.39% (1/72) 5.17 0.027356 0.047565
GO:0042398 cellular modified amino acid biosynthetic process 1.39% (1/72) 5.09 0.029041 0.049166
GO:0008173 RNA methyltransferase activity 1.39% (1/72) 5.09 0.029041 0.049166
GO:0022613 ribonucleoprotein complex biogenesis 1.39% (1/72) 5.09 0.029041 0.049166
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_162 0.02 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_2 0.028 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.027 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_54 0.024 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_71 0.024 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_84 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.025 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_120 0.043 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_145 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_205 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_266 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_6 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_53 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_283 0.025 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_19 0.022 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_75 0.024 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_136 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_141 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_151 0.03 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_92 0.022 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_93 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_99 0.027 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_10 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_13 0.021 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_18 0.041 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_86 0.028 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_12 0.031 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.031 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_53 0.032 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_67 0.017 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_75 0.031 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_78 0.036 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.038 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.039 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_114 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_131 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_155 0.062 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_120 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_38 0.048 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_57 0.026 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_184 0.033 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_26 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_35 0.021 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_71 0.039 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_11 0.017 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_41 0.02 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_174 0.022 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_132 0.03 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_88 0.032 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_16 0.027 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_49 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_132 0.015 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_34 0.028 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.066 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_64 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_9 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_12 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_40 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_60 0.073 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_71 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_130 0.095 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_207 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_256 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_217 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_238 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_112 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_131 0.019 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_56 0.02 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_140 0.026 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_272 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.034 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_22 0.023 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_53 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.078 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.017 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_66 0.026 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.053 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_90 0.031 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_93 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_84 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_169 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_15 0.021 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_141 0.039 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_30 0.047 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_75 0.063 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_109 0.04 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_28 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_71 0.025 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_65 0.09 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_121 0.045 OrthoFinder output from all 47 species Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms