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GO:0006399: tRNA metabolic process (Biological process)

"The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established." [ISBN:0198506732]


There are 31913 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_143 Abrodictyum obscurum 2.86 % 0.004143 0.021102
Cluster_281 Actinostachys digitata 1.66 % 0.001136 0.040886
Cluster_244 Actinostachys digitata 2.27 % 0.004424 0.021201
Cluster_294 Actinostachys digitata 1.67 % 0.008062 0.030484
Cluster_68 Angiopteris evecta 1.67 % 0.001231 0.007301
Cluster_95 Angiopteris evecta 1.38 % 0.012464 0.031362
Cluster_124 Azolla filiculoides 4.9 % 0.000855 0.039336
Cluster_120 Azolla filiculoides 8.11 % 0.002353 0.038919
Cluster_120 Adiantum latifolium 3.7 % 0.000328 0.001872
Cluster_9 Adiantum latifolium 2.17 % 0.001543 0.031058
Cluster_507 Amblovenatum opulentum 50.0 % 0.002572 0.018741
Cluster_160 Amblovenatum opulentum 2.7 % 0.004166 0.034788
Cluster_235 Amblovenatum opulentum 1.67 % 0.001672 0.011149
Cluster_466 Amblovenatum opulentum 50.0 % 0.002572 0.018373
Cluster_36 Amblovenatum opulentum 2.58 % 5.1e-05 0.000302
Cluster_289 Amblovenatum opulentum 2.33 % 0.005582 0.025027
Cluster_136 Alsophila spinulosa 2.29 % 0.000158 0.004021
Cluster_66 Alsophila spinulosa 2.05 % 0.000239 0.040115
Cluster_101 Amborella trichopoda 3.17 % 2.1e-05 0.00028
Cluster_92 Amborella trichopoda 2.36 % 0.006433 0.026017
Cluster_220 Cibotium barometz 3.37 % 0.000102 0.001184
Cluster_73 Cyanophora paradoxa 9.52 % 8e-06 3.6e-05
Cluster_71 Cyanophora paradoxa 3.45 % 0.000412 0.003416
Cluster_27 Cyanophora paradoxa 2.6 % 0.000281 0.012408
Cluster_13 Cyanophora paradoxa 2.78 % 0.000929 0.005882
Cluster_18 Cyanophora paradoxa 9.76 % 7e-06 7.2e-05
Cluster_33 Chlamydomonas reinhardtii 4.86 % 1e-06 7e-06
Cluster_71 Chlamydomonas reinhardtii 3.33 % 0.003506 0.0144
Cluster_81 Chlamydomonas reinhardtii 10.87 % 0.0 3e-06
Cluster_10 Ceratopteris richardii 2.91 % 2.1e-05 0.00016
Cluster_131 Ceratopteris richardii 6.25 % 0.0 1e-06
Cluster_120 Diplazium proliferum (Lam.) Kaulf. 1.59 % 0.011276 0.042687
Cluster_144 Diplazium proliferum (Lam.) Kaulf. 4.65 % 0.001383 0.013831
Cluster_130 Diplazium proliferum (Lam.) Kaulf. 2.02 % 0.007099 0.023103
Cluster_195 Dicranopteris curranii 2.94 % 0.004519 0.026069
Cluster_178 Dicranopteris curranii 1.6 % 0.014571 0.04695
Cluster_76 Dicranopteris curranii 3.76 % 2e-06 1.7e-05
Cluster_120 Dicranopteris curranii 9.33 % 0.0 0.0
Cluster_220 Dicranopteris curranii 3.8 % 0.00022 0.001385
Cluster_168 Dicranopteris curranii 7.14 % 0.0 0.0
Cluster_26 Davallia denticulata 3.7 % 0.0 0.0
Cluster_135 Ginkgo biloba 4.55 % 1e-06 7e-06
Cluster_525 Ginkgo biloba 66.67 % 7e-06 2.5e-05
Cluster_83 Lygodium flexuosum 2.54 % 1.9e-05 0.000261
Cluster_61 Microlepia speluncae 2.3 % 0.005169 0.030753
Cluster_34 Microlepia speluncae 2.2 % 0.00564 0.01742
Cluster_41 Marchantia polymorpha 6.85 % 0.0 0.0
Cluster_50 Marchantia polymorpha 6.74 % 0.0 0.0
Cluster_66 Marchantia polymorpha 2.73 % 0.006511 0.020835
Cluster_165 Nephrolepis biserrata 1.65 % 0.011387 0.030725
Cluster_170 Nephrolepis biserrata 3.28 % 0.00302 0.018295
Cluster_72 Nephrolepis biserrata 7.14 % 2.5e-05 0.000268
Cluster_47 Ophioglossum reticulatum 3.28 % 0.004463 0.048569
Cluster_98 Ophioglossum reticulatum 2.46 % 0.001052 0.005979
Cluster_60 Oryza sativa 4.26 % 0.0 0.0
Cluster_145 Oryza sativa 3.19 % 0.001612 0.009606
Cluster_224 Oryza sativa 50.0 % 0.004877 0.017734
Cluster_111 Oryza sativa 1.64 % 0.010338 0.025519
Cluster_71 Oryza sativa 4.92 % 0.000459 0.005506
Cluster_308 Oryza sativa 50.0 % 0.004877 0.02476
Cluster_256 Picea abies 2.06 % 0.008576 0.027534
Cluster_100 Picea abies 3.14 % 4e-06 2.3e-05
Cluster_241 Picea abies 1.55 % 0.002763 0.01079
Cluster_19 Picea abies 3.26 % 0.000322 0.00781
Cluster_43 Picea abies 4.26 % 0.002085 0.013649
Cluster_764 Picea abies 50.0 % 0.002849 0.010686
Cluster_199 Pleocnemia irregularis 2.56 % 0.009227 0.049546
Cluster_226 Pleocnemia irregularis 2.37 % 0.000285 0.010563
Cluster_352 Pleocnemia irregularis 50.0 % 0.003681 0.026588
Cluster_10 Psilotum nudum 1.8 % 0.002381 0.025891
Cluster_342 Physcomitrella patens 50.0 % 0.00154 0.010999
Cluster_130 Physcomitrella patens 4.08 % 0.000655 0.005765
Cluster_347 Physcomitrella patens 50.0 % 0.00154 0.010999
Cluster_103 Physcomitrella patens 5.26 % 1.1e-05 0.000429
Cluster_11 Pyrrosia piloselloides 2.74 % 0.002589 0.019957
Cluster_272 Pyrrosia piloselloides 1.56 % 0.007722 0.042543
Cluster_115 Salvinia molesta 3.51 % 1e-06 3.2e-05
Cluster_67 Salvinia cucullata 3.85 % 0.00014 0.004162
Cluster_32 Salvinia cucullata 3.03 % 0.000422 0.013266
Cluster_57 Salvinia cucullata 3.5 % 0.000218 0.004561
Cluster_331 Solanum lycopersicum 50.0 % 0.005685 0.037902
Cluster_133 Solanum lycopersicum 4.42 % 0.0 1e-06
Cluster_448 Solanum lycopersicum 50.0 % 0.005685 0.031675
Cluster_19 Solanum lycopersicum 2.01 % 0.002561 0.009497
Cluster_477 Solanum lycopersicum 50.0 % 0.005685 0.037902
Cluster_90 Selaginella moellendorffii 8.82 % 0.0 0.0
Cluster_87 Selaginella moellendorffii 3.9 % 0.000692 0.007555
Cluster_41 Stenochlaena palustris 2.8 % 0.000355 0.006494
Cluster_169 Stenochlaena palustris 4.35 % 9.7e-05 0.001171
Cluster_181 Tectaria incisa 2.4 % 0.000497 0.006346
Cluster_198 Tectaria incisa 50.0 % 0.002447 0.00603
Cluster_206 Tectaria incisa 50.0 % 0.002447 0.017478
Cluster_141 Tectaria incisa 1.57 % 0.001689 0.010389
Cluster_315 Vitis vinifera 50.0 % 0.007274 0.024248
Cluster_44 Vitis vinifera 2.65 % 0.002289 0.013093
Cluster_351 Vitis vinifera 50.0 % 0.007274 0.030137
Cluster_71 Zea mays 5.13 % 0.0 2e-06
Cluster_183 Zea mays 13.89 % 0.0 0.0
Cluster_59 Zea mays 4.8 % 0.0 4e-06
Cluster_11 Zea mays 3.93 % 0.0 1e-06
Cluster_28 Zea mays 2.19 % 0.002934 0.014977
Cluster_734 Zea mays 50.0 % 0.004133 0.027552
Cluster_11 Arabidopsis thaliana 8.47 % 4e-06 5.7e-05
Cluster_134 Arabidopsis thaliana 25.49 % 0.0 0.0
Cluster_38 Arabidopsis thaliana 6.38 % 0.000829 0.00551
Cluster_65 Arabidopsis thaliana 4.0 % 0.000647 0.006913
Sequences (31913) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !