Coexpression cluster: Cluster_184 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 20.9% (14/67) 2.87 0.0 1e-06
GO:0003723 RNA binding 14.93% (10/67) 3.78 0.0 1e-06
GO:0003674 molecular_function 52.24% (35/67) 1.33 0.0 1e-06
GO:1901363 heterocyclic compound binding 26.87% (18/67) 2.01 0.0 8e-06
GO:0097159 organic cyclic compound binding 26.87% (18/67) 2.01 0.0 8e-06
GO:0005488 binding 35.82% (24/67) 1.62 0.0 1.1e-05
GO:0006807 nitrogen compound metabolic process 19.4% (13/67) 1.78 8.6e-05 0.002314
GO:0043170 macromolecule metabolic process 17.91% (12/67) 1.83 0.000115 0.002722
GO:0043412 macromolecule modification 10.45% (7/67) 2.62 0.000146 0.003076
GO:0006139 nucleobase-containing compound metabolic process 8.96% (6/67) 2.84 0.000194 0.003669
GO:0046483 heterocycle metabolic process 8.96% (6/67) 2.69 0.00034 0.004594
GO:0006725 cellular aromatic compound metabolic process 8.96% (6/67) 2.69 0.00034 0.004594
GO:0008152 metabolic process 20.9% (14/67) 1.44 0.000492 0.004893
GO:0003824 catalytic activity 23.88% (16/67) 1.38 0.000286 0.004913
GO:1901360 organic cyclic compound metabolic process 8.96% (6/67) 2.64 0.000416 0.004916
GO:0044238 primary metabolic process 19.4% (13/67) 1.55 0.000397 0.005008
GO:0016579 protein deubiquitination 2.99% (2/67) 5.96 0.000482 0.005062
GO:0070646 protein modification by small protein removal 2.99% (2/67) 5.96 0.000482 0.005062
GO:0090304 nucleic acid metabolic process 7.46% (5/67) 3.08 0.000324 0.005105
GO:0101005 deubiquitinase activity 2.99% (2/67) 5.74 0.00065 0.005586
GO:0004843 cysteine-type deubiquitinase activity 2.99% (2/67) 5.74 0.00065 0.005586
GO:0019783 ubiquitin-like protein peptidase activity 2.99% (2/67) 5.64 0.000744 0.00611
GO:0071704 organic substance metabolic process 19.4% (13/67) 1.48 0.000648 0.00612
GO:0036211 protein modification process 8.96% (6/67) 2.46 0.000781 0.006152
GO:0140096 catalytic activity, acting on a protein 10.45% (7/67) 2.17 0.000924 0.006983
GO:0008452 RNA ligase activity 1.49% (1/67) 9.6 0.00129 0.008124
GO:0005049 nuclear export signal receptor activity 1.49% (1/67) 9.6 0.00129 0.008124
GO:0007031 peroxisome organization 1.49% (1/67) 9.6 0.00129 0.008124
GO:0000012 single strand break repair 1.49% (1/67) 9.6 0.00129 0.008124
GO:0003972 RNA ligase (ATP) activity 1.49% (1/67) 9.6 0.00129 0.008124
GO:0000428 DNA-directed RNA polymerase complex 1.49% (1/67) 8.6 0.002577 0.013531
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 1.49% (1/67) 8.6 0.002577 0.013531
GO:0005666 RNA polymerase III complex 1.49% (1/67) 8.6 0.002577 0.013531
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 1.49% (1/67) 8.6 0.002577 0.013531
GO:0055029 nuclear DNA-directed RNA polymerase complex 1.49% (1/67) 8.6 0.002577 0.013531
GO:0016787 hydrolase activity 10.45% (7/67) 1.95 0.002233 0.013615
GO:0006281 DNA repair 2.99% (2/67) 4.72 0.002673 0.013654
GO:0006974 cellular response to DNA damage stimulus 2.99% (2/67) 4.62 0.003041 0.014368
GO:0033554 cellular response to stress 2.99% (2/67) 4.62 0.003041 0.014368
GO:0051716 cellular response to stimulus 2.99% (2/67) 4.62 0.003041 0.014368
GO:0004518 nuclease activity 2.99% (2/67) 4.58 0.003233 0.014904
GO:0006383 transcription by RNA polymerase III 1.49% (1/67) 8.01 0.003864 0.017386
GO:0070647 protein modification by small protein conjugation or removal 2.99% (2/67) 4.3 0.004734 0.020807
GO:0016886 ligase activity, forming phosphoric ester bonds 1.49% (1/67) 7.6 0.005148 0.022114
GO:0005778 peroxisomal membrane 1.49% (1/67) 7.28 0.006431 0.025862
GO:0030880 RNA polymerase complex 1.49% (1/67) 7.28 0.006431 0.025862
GO:0031903 microbody membrane 1.49% (1/67) 7.28 0.006431 0.025862
GO:0140142 nucleocytoplasmic carrier activity 1.49% (1/67) 7.01 0.007713 0.028582
GO:0004402 histone acetyltransferase activity 1.49% (1/67) 7.01 0.007713 0.028582
GO:0061733 peptide-lysine-N-acetyltransferase activity 1.49% (1/67) 7.01 0.007713 0.028582
GO:0034212 peptide N-acetyltransferase activity 1.49% (1/67) 7.01 0.007713 0.028582
GO:0008234 cysteine-type peptidase activity 2.99% (2/67) 3.88 0.008211 0.029843
GO:0008150 biological_process 22.39% (15/67) 0.95 0.008815 0.030851
GO:0008080 N-acetyltransferase activity 1.49% (1/67) 6.79 0.008992 0.030901
GO:0016070 RNA metabolic process 4.48% (3/67) 2.83 0.008792 0.031351
GO:0018394 peptidyl-lysine acetylation 1.49% (1/67) 6.6 0.010271 0.032352
GO:0018393 internal peptidyl-lysine acetylation 1.49% (1/67) 6.6 0.010271 0.032352
GO:0016573 histone acetylation 1.49% (1/67) 6.6 0.010271 0.032352
GO:0006475 internal protein amino acid acetylation 1.49% (1/67) 6.6 0.010271 0.032352
GO:0008233 peptidase activity 4.48% (3/67) 2.77 0.00977 0.032973
GO:0043543 protein acylation 1.49% (1/67) 6.43 0.011547 0.033575
GO:0006473 protein acetylation 1.49% (1/67) 6.43 0.011547 0.033575
GO:0003684 damaged DNA binding 1.49% (1/67) 6.43 0.011547 0.033575
GO:0140104 molecular carrier activity 1.49% (1/67) 6.43 0.011547 0.033575
GO:0016410 N-acyltransferase activity 1.49% (1/67) 6.43 0.011547 0.033575
GO:0004527 exonuclease activity 1.49% (1/67) 6.28 0.012822 0.036169
GO:0008408 3'-5' exonuclease activity 1.49% (1/67) 6.28 0.012822 0.036169
GO:0006259 DNA metabolic process 2.99% (2/67) 3.53 0.013083 0.036364
GO:0006508 proteolysis 4.48% (3/67) 2.6 0.013631 0.037338
GO:0018205 peptidyl-lysine modification 1.49% (1/67) 6.14 0.014095 0.038057
GO:0016570 histone modification 1.49% (1/67) 5.9 0.016637 0.041373
GO:0004523 RNA-DNA hybrid ribonuclease activity 1.49% (1/67) 5.9 0.016637 0.041373
GO:0042579 microbody 1.49% (1/67) 5.9 0.016637 0.041373
GO:0016407 acetyltransferase activity 1.49% (1/67) 5.9 0.016637 0.041373
GO:0009982 pseudouridine synthase activity 1.49% (1/67) 5.9 0.016637 0.041373
GO:0005524 ATP binding 7.46% (5/67) 1.74 0.017174 0.041613
GO:0019538 protein metabolic process 10.45% (7/67) 1.39 0.01707 0.041899
GO:0034641 cellular nitrogen compound metabolic process 8.96% (6/67) 1.56 0.016217 0.04317
GO:0140098 catalytic activity, acting on RNA 2.99% (2/67) 3.29 0.018066 0.043222
GO:0061695 transferase complex, transferring phosphorus-containing groups 1.49% (1/67) 5.69 0.019172 0.044189
GO:0005515 protein binding 8.96% (6/67) 1.51 0.019011 0.04436
GO:0032559 adenyl ribonucleotide binding 7.46% (5/67) 1.7 0.019009 0.044908
GO:0016740 transferase activity 8.96% (6/67) 1.47 0.020849 0.047475
GO:0001522 pseudouridine synthesis 1.49% (1/67) 5.51 0.021701 0.048826
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_156 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_166 0.019 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_187 0.03 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_7 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_20 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_29 0.027 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_59 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_78 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.025 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_123 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_234 0.028 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_266 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_53 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_283 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_75 0.029 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_110 0.015 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_130 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_148 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_151 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_14 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_99 0.027 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_18 0.029 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_24 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_99 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_241 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_75 0.021 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_85 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_42 0.031 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_73 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_114 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_135 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_120 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_213 0.027 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_21 0.022 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_190 0.021 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_28 0.023 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_75 0.015 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_97 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_8 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_16 0.023 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_98 0.024 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_116 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_129 0.02 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_133 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_129 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_88 0.042 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_5 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_16 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_39 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_132 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_142 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_166 0.015 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_3 0.029 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_130 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_90 0.042 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_110 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_143 0.022 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_130 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_67 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_81 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_20 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_87 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_112 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_178 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_272 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_141 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.026 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_181 0.029 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_185 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_8 0.03 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_59 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_33 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_34 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_74 0.022 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.025 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_86 0.018 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_90 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_93 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_56 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_144 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_210 0.031 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_141 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_93 0.027 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_117 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_145 0.031 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_163 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_183 0.033 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_3 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.023 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_79 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_109 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_127 0.019 OrthoFinder output from all 47 species Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms