Coexpression cluster: Cluster_81 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0097159 organic cyclic compound binding 52.17% (24/46) 2.48 0.0 0.0
GO:1901363 heterocyclic compound binding 52.17% (24/46) 2.48 0.0 0.0
GO:0005488 binding 63.04% (29/46) 2.03 0.0 0.0
GO:0016874 ligase activity 17.39% (8/46) 5.34 0.0 0.0
GO:0005852 eukaryotic translation initiation factor 3 complex 8.7% (4/46) 8.59 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 15.22% (7/46) 5.67 0.0 0.0
GO:0003674 molecular_function 73.91% (34/46) 1.44 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 13.04% (6/46) 6.22 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 13.04% (6/46) 6.22 0.0 0.0
GO:0003743 translation initiation factor activity 10.87% (5/46) 7.11 0.0 0.0
GO:0006520 amino acid metabolic process 15.22% (7/46) 5.29 0.0 0.0
GO:0006082 organic acid metabolic process 17.39% (8/46) 4.77 0.0 0.0
GO:0043436 oxoacid metabolic process 17.39% (8/46) 4.77 0.0 0.0
GO:0003676 nucleic acid binding 30.43% (14/46) 3.1 0.0 0.0
GO:0019752 carboxylic acid metabolic process 17.39% (8/46) 4.78 0.0 0.0
GO:0045182 translation regulator activity 10.87% (5/46) 6.52 0.0 0.0
GO:0008135 translation factor activity, RNA binding 10.87% (5/46) 6.52 0.0 0.0
GO:0090079 translation regulator activity, nucleic acid binding 10.87% (5/46) 6.52 0.0 0.0
GO:0043039 tRNA aminoacylation 10.87% (5/46) 6.01 0.0 0.0
GO:0043038 amino acid activation 10.87% (5/46) 6.01 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 15.22% (7/46) 4.63 0.0 0.0
GO:0044281 small molecule metabolic process 19.57% (9/46) 3.49 0.0 1e-06
GO:0140640 catalytic activity, acting on a nucleic acid 15.22% (7/46) 4.08 0.0 1e-06
GO:0006399 tRNA metabolic process 10.87% (5/46) 5.01 0.0 3e-06
GO:0003723 RNA binding 13.04% (6/46) 4.14 1e-06 6e-06
GO:0034660 ncRNA metabolic process 10.87% (5/46) 4.59 2e-06 1.1e-05
GO:0005737 cytoplasm 8.7% (4/46) 5.27 3e-06 1.9e-05
GO:0005525 GTP binding 10.87% (5/46) 4.14 9e-06 4.5e-05
GO:0032561 guanyl ribonucleotide binding 10.87% (5/46) 4.14 9e-06 4.5e-05
GO:0019001 guanyl nucleotide binding 10.87% (5/46) 4.14 9e-06 4.5e-05
GO:0009089 lysine biosynthetic process via diaminopimelate 4.35% (2/46) 8.01 2e-05 8.2e-05
GO:0009085 lysine biosynthetic process 4.35% (2/46) 8.01 2e-05 8.2e-05
GO:0006553 lysine metabolic process 4.35% (2/46) 8.01 2e-05 8.2e-05
GO:0046451 diaminopimelate metabolic process 4.35% (2/46) 8.01 2e-05 8.2e-05
GO:0032553 ribonucleotide binding 23.91% (11/46) 2.17 2.1e-05 8.5e-05
GO:0097367 carbohydrate derivative binding 23.91% (11/46) 2.17 2.2e-05 8.7e-05
GO:0035639 purine ribonucleoside triphosphate binding 23.91% (11/46) 2.2 1.8e-05 8.8e-05
GO:0032555 purine ribonucleotide binding 23.91% (11/46) 2.19 1.9e-05 8.8e-05
GO:0006418 tRNA aminoacylation for protein translation 6.52% (3/46) 5.65 2.8e-05 0.000107
GO:0017076 purine nucleotide binding 23.91% (11/46) 2.12 2.9e-05 0.000109
GO:0043648 dicarboxylic acid metabolic process 4.35% (2/46) 7.59 3.9e-05 0.000144
GO:0043168 anion binding 23.91% (11/46) 2.05 4.6e-05 0.000158
GO:0000166 nucleotide binding 23.91% (11/46) 2.05 4.6e-05 0.000158
GO:1901265 nucleoside phosphate binding 23.91% (11/46) 2.05 4.6e-05 0.000158
GO:0036094 small molecule binding 23.91% (11/46) 1.98 7.3e-05 0.000242
GO:0009067 aspartate family amino acid biosynthetic process 4.35% (2/46) 7.01 9.8e-05 0.00032
GO:0046394 carboxylic acid biosynthetic process 6.52% (3/46) 4.97 0.000119 0.00038
GO:0009066 aspartate family amino acid metabolic process 4.35% (2/46) 6.78 0.000137 0.000428
GO:0016053 organic acid biosynthetic process 6.52% (3/46) 4.82 0.000162 0.000497
GO:0000049 tRNA binding 4.35% (2/46) 6.59 0.000182 0.000547
GO:0016070 RNA metabolic process 10.87% (5/46) 3.2 0.000205 0.000602
GO:0006413 translational initiation 4.35% (2/46) 6.13 0.000356 0.001028
GO:0005515 protein binding 17.39% (8/46) 2.05 0.00059 0.001669
GO:1901607 alpha-amino acid biosynthetic process 4.35% (2/46) 5.68 0.000676 0.00181
GO:0044283 small molecule biosynthetic process 6.52% (3/46) 4.13 0.000666 0.001816
GO:0043167 ion binding 23.91% (11/46) 1.61 0.00066 0.001835
GO:0016879 ligase activity, forming carbon-nitrogen bonds 4.35% (2/46) 5.27 0.001213 0.003137
GO:1901605 alpha-amino acid metabolic process 4.35% (2/46) 5.27 0.001213 0.003137
GO:0044237 cellular metabolic process 23.91% (11/46) 1.5 0.001285 0.003268
GO:0090304 nucleic acid metabolic process 10.87% (5/46) 2.6 0.001327 0.003318
GO:0003824 catalytic activity 32.61% (15/46) 1.16 0.001569 0.003859
GO:0034641 cellular nitrogen compound metabolic process 15.22% (7/46) 2.0 0.00163 0.003945
GO:0008652 amino acid biosynthetic process 4.35% (2/46) 5.01 0.001751 0.004168
GO:0006139 nucleobase-containing compound metabolic process 13.04% (6/46) 2.18 0.001954 0.004579
GO:0004826 phenylalanine-tRNA ligase activity 2.17% (1/46) 8.59 0.002593 0.005256
GO:0004019 adenylosuccinate synthase activity 2.17% (1/46) 8.59 0.002593 0.005256
GO:0004592 pantoate-beta-alanine ligase activity 2.17% (1/46) 8.59 0.002593 0.005256
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 2.17% (1/46) 8.59 0.002593 0.005256
GO:0008837 diaminopimelate epimerase activity 2.17% (1/46) 8.59 0.002593 0.005256
GO:0004814 arginine-tRNA ligase activity 2.17% (1/46) 8.59 0.002593 0.005256
GO:0047661 amino-acid racemase activity 2.17% (1/46) 8.59 0.002593 0.005256
GO:0006420 arginyl-tRNA aminoacylation 2.17% (1/46) 8.59 0.002593 0.005256
GO:0036361 racemase activity, acting on amino acids and derivatives 2.17% (1/46) 8.59 0.002593 0.005256
GO:0031369 translation initiation factor binding 2.17% (1/46) 8.59 0.002593 0.005256
GO:1901566 organonitrogen compound biosynthetic process 8.7% (4/46) 2.78 0.002708 0.005417
GO:0006725 cellular aromatic compound metabolic process 13.04% (6/46) 2.07 0.002873 0.005671
GO:0046483 heterocycle metabolic process 13.04% (6/46) 2.06 0.002952 0.00575
GO:1901564 organonitrogen compound metabolic process 19.57% (9/46) 1.55 0.003024 0.005816
GO:1901360 organic cyclic compound metabolic process 13.04% (6/46) 2.03 0.003309 0.006283
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.52% (3/46) 3.26 0.003794 0.007114
GO:0016462 pyrophosphatase activity 6.52% (3/46) 3.15 0.004638 0.008588
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.52% (3/46) 3.13 0.004839 0.008852
GO:0016817 hydrolase activity, acting on acid anhydrides 6.52% (3/46) 3.12 0.004942 0.008931
GO:0015940 pantothenate biosynthetic process 2.17% (1/46) 7.59 0.005179 0.009033
GO:0015939 pantothenate metabolic process 2.17% (1/46) 7.59 0.005179 0.009033
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 2.17% (1/46) 7.59 0.005179 0.009033
GO:0009987 cellular process 26.09% (12/46) 1.14 0.006001 0.010346
GO:0016854 racemase and epimerase activity 2.17% (1/46) 7.01 0.007759 0.013077
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 2.17% (1/46) 7.01 0.007759 0.013077
GO:0003924 GTPase activity 4.35% (2/46) 3.89 0.008031 0.013386
GO:0032991 protein-containing complex 8.7% (4/46) 2.17 0.011717 0.019313
GO:0008152 metabolic process 23.91% (11/46) 1.07 0.012233 0.019946
GO:0002161 aminoacyl-tRNA editing activity 2.17% (1/46) 6.27 0.012899 0.020804
GO:0016881 acid-amino acid ligase activity 2.17% (1/46) 6.01 0.015459 0.024409
GO:0042398 cellular modified amino acid biosynthetic process 2.17% (1/46) 6.01 0.015459 0.024409
GO:0005524 ATP binding 13.04% (6/46) 1.5 0.018145 0.028351
GO:0032559 adenyl ribonucleotide binding 13.04% (6/46) 1.5 0.018543 0.028674
GO:0006807 nitrogen compound metabolic process 19.57% (9/46) 1.1 0.021156 0.032381
GO:0030554 adenyl nucleotide binding 13.04% (6/46) 1.42 0.023326 0.034989
GO:0006575 cellular modified amino acid metabolic process 2.17% (1/46) 5.42 0.0231 0.035001
GO:0052689 carboxylic ester hydrolase activity 2.17% (1/46) 5.27 0.025635 0.038071
GO:0044249 cellular biosynthetic process 8.7% (4/46) 1.8 0.027234 0.04005
GO:0072330 monocarboxylic acid biosynthetic process 2.17% (1/46) 5.01 0.030684 0.044685
GO:1901576 organic substance biosynthetic process 8.7% (4/46) 1.71 0.033079 0.047711
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_151 0.022 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_153 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_176 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_89 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.055 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_120 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_211 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_6 0.041 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_53 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_111 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_283 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_314 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_130 0.015 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_139 0.022 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_151 0.027 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_44 0.022 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_284 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_292 0.024 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_13 0.052 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_18 0.037 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_10 0.04 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_33 0.043 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_127 0.027 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_16 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_112 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_120 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_38 0.023 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_26 0.022 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_32 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_71 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_31 0.023 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_159 0.026 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_145 0.029 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_13 0.024 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_39 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_45 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_52 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_94 0.028 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_61 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.061 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.027 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_12 0.062 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_34 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_72 0.027 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_75 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_137 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_60 0.059 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_111 0.024 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_120 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_130 0.021 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_238 0.036 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_256 0.029 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_259 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_127 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_128 0.025 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_140 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_121 0.022 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_120 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_42 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_182 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_81 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_82 0.026 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_145 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_179 0.022 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_57 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_8 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.036 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_148 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_39 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.034 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_93 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_47 0.033 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_137 0.034 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_169 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_185 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_206 0.025 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_141 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_181 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_30 0.036 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_56 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_92 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_59 0.041 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_71 0.036 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_183 0.038 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_65 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_105 0.022 OrthoFinder output from all 47 species Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms