Coexpression cluster: Cluster_53 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000439 transcription factor TFIIH core complex 1.27% (2/158) 8.82 5e-06 0.001301
GO:0003723 RNA binding 6.33% (10/158) 2.25 5.5e-05 0.007365
GO:0006139 nucleobase-containing compound metabolic process 5.7% (9/158) 2.19 0.000178 0.009544
GO:0003676 nucleic acid binding 9.49% (15/158) 1.6 0.000147 0.009849
GO:0140513 nuclear protein-containing complex 2.53% (4/158) 3.72 0.000257 0.011465
GO:0006289 nucleotide-excision repair 1.27% (2/158) 6.82 0.000135 0.012036
GO:0046483 heterocycle metabolic process 5.7% (9/158) 2.07 0.000337 0.012884
GO:0006725 cellular aromatic compound metabolic process 5.7% (9/158) 2.04 0.000393 0.013155
GO:1901360 organic cyclic compound metabolic process 5.7% (9/158) 2.01 0.000447 0.013303
GO:0090304 nucleic acid metabolic process 4.43% (7/158) 2.35 0.000497 0.013329
GO:0005488 binding 22.78% (36/158) 0.8 0.000571 0.013905
GO:0003674 molecular_function 34.18% (54/158) 0.59 0.000702 0.015668
GO:1990904 ribonucleoprotein complex 1.9% (3/158) 4.07 0.000796 0.016419
GO:0090575 RNA polymerase II transcription regulator complex 1.27% (2/158) 5.18 0.001408 0.02696
GO:0003682 chromatin binding 1.27% (2/158) 4.96 0.001895 0.033857
GO:0005667 transcription regulator complex 1.27% (2/158) 4.73 0.0026 0.043542
GO:0034457 Mpp10 complex 0.63% (1/158) 7.82 0.004416 0.047335
GO:0001181 RNA polymerase I general transcription initiation factor activity 0.63% (1/158) 7.82 0.004416 0.047335
GO:0031179 peptide modification 0.63% (1/158) 7.82 0.004416 0.047335
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 0.63% (1/158) 7.82 0.004416 0.047335
GO:0006361 transcription initiation at RNA polymerase I promoter 0.63% (1/158) 7.82 0.004416 0.047335
GO:0140223 general transcription initiation factor activity 0.63% (1/158) 7.82 0.004416 0.047335
GO:0007029 endoplasmic reticulum organization 0.63% (1/158) 7.82 0.004416 0.047335
GO:0004730 pseudouridylate synthase activity 0.63% (1/158) 7.82 0.004416 0.047335
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_36 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_125 0.023 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_126 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_151 0.031 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_162 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_163 0.019 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_166 0.021 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_187 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_388 0.019 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_123 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_3 0.027 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_6 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_7 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_16 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_26 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_45 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_57 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_84 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_89 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.031 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_92 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_114 0.021 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_120 0.018 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_145 0.021 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_20 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_133 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_147 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_205 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_234 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_254 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_328 0.015 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_17 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_23 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_37 0.022 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_54 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_69 0.026 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_84 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_120 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_130 0.034 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_141 0.029 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_151 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_35 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_90 0.022 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_108 0.015 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_24 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_26 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_90 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_85 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_53 0.033 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_73 0.015 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_75 0.025 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_33 0.027 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.034 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_89 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_114 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.046 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_129 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_142 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_155 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_41 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_117 0.055 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_118 0.017 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_120 0.019 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_154 0.026 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_57 0.045 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_149 0.022 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_165 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_184 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_195 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_219 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_16 0.015 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_21 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_190 0.022 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_54 0.028 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_71 0.034 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_73 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_85 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_16 0.033 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_41 0.021 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_41 0.022 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_88 0.04 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_144 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_5 0.027 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_61 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_164 0.015 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_11 0.021 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_15 0.025 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.028 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_56 0.026 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_25 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_153 0.018 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_33 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_40 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_113 0.021 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_118 0.042 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_130 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.045 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_60 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_145 0.017 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_170 0.025 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_40 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_44 0.026 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_212 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_74 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_107 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_119 0.031 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_172 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_192 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_223 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_262 0.032 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_263 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_29 0.023 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_40 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_46 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_57 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_91 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_121 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_137 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_280 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_25 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_146 0.023 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_181 0.031 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_4 0.024 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_34 0.021 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_40 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_47 0.015 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_55 0.019 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_57 0.021 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_58 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_61 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.034 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_33 0.025 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_34 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_47 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_58 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_74 0.034 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_81 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_130 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_136 0.015 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_37 0.015 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_8 0.024 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_56 0.025 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_57 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_79 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_84 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_169 0.026 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_185 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_186 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_195 0.025 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_200 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_210 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_15 0.025 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_73 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_80 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_141 0.028 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_175 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_30 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_75 0.025 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_95 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_100 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_101 0.015 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_59 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_65 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_120 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_137 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_183 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_24 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_49 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_68 0.026 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_73 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_76 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_94 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_98 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_99 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_103 0.025 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_121 0.028 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_125 0.02 OrthoFinder output from all 47 species Compare
Sequences (158) (download table)

InterPro Domains

GO Terms

Family Terms