Coexpression cluster: Cluster_18 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 amino acid metabolic process 14.63% (6/41) 5.3 0.0 1e-06
GO:0006082 organic acid metabolic process 14.63% (6/41) 4.78 0.0 3e-06
GO:0043436 oxoacid metabolic process 14.63% (6/41) 4.8 0.0 3e-06
GO:0019752 carboxylic acid metabolic process 14.63% (6/41) 4.83 0.0 4e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 9.76% (4/41) 5.81 1e-06 1e-05
GO:0004812 aminoacyl-tRNA ligase activity 9.76% (4/41) 5.81 1e-06 1e-05
GO:0043038 amino acid activation 9.76% (4/41) 5.84 1e-06 1.1e-05
GO:0043039 tRNA aminoacylation 9.76% (4/41) 5.84 1e-06 1.1e-05
GO:0006418 tRNA aminoacylation for protein translation 9.76% (4/41) 5.95 1e-06 1.3e-05
GO:0016874 ligase activity 12.2% (5/41) 4.93 1e-06 1.3e-05
GO:0140101 catalytic activity, acting on a tRNA 9.76% (4/41) 5.23 4e-06 4.4e-05
GO:0006399 tRNA metabolic process 9.76% (4/41) 5.03 7e-06 7.2e-05
GO:0044281 small molecule metabolic process 14.63% (6/41) 3.45 1.7e-05 0.000161
GO:0034660 ncRNA metabolic process 9.76% (4/41) 4.66 1.9e-05 0.000166
GO:0140098 catalytic activity, acting on RNA 9.76% (4/41) 4.15 7.6e-05 0.000633
GO:0008152 metabolic process 26.83% (11/41) 1.89 0.000114 0.000894
GO:0003674 molecular_function 46.34% (19/41) 1.15 0.000232 0.001703
GO:0071704 organic substance metabolic process 24.39% (10/41) 1.87 0.000275 0.001912
GO:0140640 catalytic activity, acting on a nucleic acid 9.76% (4/41) 3.55 0.000374 0.002458
GO:1901564 organonitrogen compound metabolic process 17.07% (7/41) 2.24 0.000609 0.003626
GO:0016070 RNA metabolic process 9.76% (4/41) 3.36 0.000604 0.003773
GO:0045182 translation regulator activity 4.88% (2/41) 5.59 0.000787 0.003935
GO:0090079 translation regulator activity, nucleic acid binding 4.88% (2/41) 5.59 0.000787 0.003935
GO:0008135 translation factor activity, RNA binding 4.88% (2/41) 5.59 0.000787 0.003935
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 4.88% (2/41) 5.59 0.000787 0.003935
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 4.88% (2/41) 5.48 0.000919 0.004254
GO:0044238 primary metabolic process 21.95% (9/41) 1.79 0.000912 0.004382
GO:1901363 heterocyclic compound binding 21.95% (9/41) 1.76 0.001038 0.004474
GO:0097159 organic cyclic compound binding 21.95% (9/41) 1.76 0.001038 0.004474
GO:0036094 small molecule binding 17.07% (7/41) 2.04 0.001333 0.005555
GO:0005488 binding 31.71% (13/41) 1.29 0.001438 0.005798
GO:0004455 ketol-acid reductoisomerase activity 2.44% (1/41) 9.23 0.00166 0.006484
GO:0016053 organic acid biosynthetic process 4.88% (2/41) 4.91 0.002014 0.00763
GO:0008150 biological_process 29.27% (12/41) 1.3 0.00218 0.008015
GO:0005737 cytoplasm 4.88% (2/41) 4.65 0.002889 0.010317
GO:0004827 proline-tRNA ligase activity 2.44% (1/41) 8.23 0.003317 0.010365
GO:0006433 prolyl-tRNA aminoacylation 2.44% (1/41) 8.23 0.003317 0.010365
GO:0009081 branched-chain amino acid metabolic process 2.44% (1/41) 8.23 0.003317 0.010365
GO:0009082 branched-chain amino acid biosynthetic process 2.44% (1/41) 8.23 0.003317 0.010365
GO:0097367 carbohydrate derivative binding 14.63% (6/41) 2.0 0.003536 0.010524
GO:0032553 ribonucleotide binding 14.63% (6/41) 2.01 0.003479 0.010606
GO:0017076 purine nucleotide binding 14.63% (6/41) 1.99 0.003733 0.01085
GO:0032555 purine ribonucleotide binding 14.63% (6/41) 2.04 0.003132 0.010873
GO:0003824 catalytic activity 24.39% (10/41) 1.36 0.004152 0.011796
GO:0006528 asparagine metabolic process 2.44% (1/41) 7.65 0.004971 0.012946
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 2.44% (1/41) 7.65 0.004971 0.012946
GO:0006529 asparagine biosynthetic process 2.44% (1/41) 7.65 0.004971 0.012946
GO:1901265 nucleoside phosphate binding 14.63% (6/41) 1.89 0.005189 0.012972
GO:0000166 nucleotide binding 14.63% (6/41) 1.89 0.005189 0.012972
GO:0043168 anion binding 14.63% (6/41) 1.91 0.004864 0.01351
GO:0044237 cellular metabolic process 17.07% (7/41) 1.66 0.005832 0.014294
GO:0044283 small molecule biosynthetic process 4.88% (2/41) 4.09 0.006213 0.014934
GO:0043167 ion binding 17.07% (7/41) 1.64 0.006369 0.015021
GO:0005852 eukaryotic translation initiation factor 3 complex 2.44% (1/41) 7.23 0.006623 0.015331
GO:0090304 nucleic acid metabolic process 9.76% (4/41) 2.39 0.007028 0.015973
GO:0032559 adenyl ribonucleotide binding 12.2% (5/41) 2.0 0.007854 0.017531
GO:0003746 translation elongation factor activity 2.44% (1/41) 6.65 0.009918 0.019074
GO:0120227 acyl-CoA binding 2.44% (1/41) 6.65 0.009918 0.019074
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 2.44% (1/41) 6.65 0.009918 0.019074
GO:0000062 fatty-acyl-CoA binding 2.44% (1/41) 6.65 0.009918 0.019074
GO:1901567 fatty acid derivative binding 2.44% (1/41) 6.65 0.009918 0.019074
GO:0006414 translational elongation 2.44% (1/41) 6.65 0.009918 0.019074
GO:0030554 adenyl nucleotide binding 12.2% (5/41) 1.95 0.009164 0.019416
GO:0009058 biosynthetic process 9.76% (4/41) 2.29 0.008857 0.019423
GO:0006807 nitrogen compound metabolic process 17.07% (7/41) 1.54 0.009092 0.019594
GO:0043170 macromolecule metabolic process 14.63% (6/41) 1.66 0.010929 0.020699
GO:0009067 aspartate family amino acid biosynthetic process 2.44% (1/41) 6.43 0.011562 0.021571
GO:0009066 aspartate family amino acid metabolic process 2.44% (1/41) 6.23 0.013203 0.024271
GO:0006629 lipid metabolic process 4.88% (2/41) 3.47 0.014143 0.025621
GO:0035639 purine ribonucleoside triphosphate binding 12.2% (5/41) 1.78 0.014383 0.025684
GO:0033218 amide binding 2.44% (1/41) 5.53 0.021369 0.037621
GO:1901681 sulfur compound binding 2.44% (1/41) 5.43 0.022994 0.03992
GO:0006139 nucleobase-containing compound metabolic process 9.76% (4/41) 1.87 0.023533 0.040296
GO:0003743 translation initiation factor activity 2.44% (1/41) 5.23 0.026236 0.043727
GO:0009987 cellular process 19.51% (8/41) 1.13 0.026205 0.044266
GO:0006725 cellular aromatic compound metabolic process 9.76% (4/41) 1.78 0.028538 0.046329
GO:0046483 heterocycle metabolic process 9.76% (4/41) 1.78 0.028281 0.046514
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 2.44% (1/41) 5.06 0.029468 0.047225
GO:1901360 organic cyclic compound metabolic process 9.76% (4/41) 1.76 0.029982 0.04744
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_4 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_72 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_168 0.031 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_192 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_36 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_226 0.028 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_304 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_396 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_399 0.018 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_17 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_69 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_115 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_9 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_70 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_486 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_152 0.027 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_190 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_241 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_251 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_87 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_1 0.024 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_29 0.021 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_48 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_81 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.037 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_10 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_131 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_149 0.025 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_67 0.015 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_152 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_142 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_148 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_26 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_40 0.015 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_193 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_117 0.019 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_151 0.022 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_139 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_219 0.024 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_166 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_66 0.036 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_111 0.033 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_23 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_60 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_256 0.023 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_443 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_96 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_137 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_162 0.026 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_52 0.022 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_79 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_89 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_9 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_62 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_72 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_126 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_193 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_10 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_28 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_39 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_85 0.023 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_86 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_8 0.023 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.018 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_90 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_115 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_196 0.032 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_87 0.015 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_113 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_107 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_46 0.025 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_157 0.028 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_183 0.041 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_38 0.038 OrthoFinder output from all 47 species Compare
Sequences (41) (download table)

InterPro Domains

GO Terms

Family Terms