Heatmap: Cluster_18 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.66 -0.82 -0.78 -0.56 -0.32 -0.11 -0.4 -0.7 0.43 0.74 0.97 1.1 -0.69 0.01 -0.82 0.78 -0.18 -0.46 -0.64 -0.7 -0.3 -0.57 0.79 0.68 -0.52 0.06
1.12 -0.69 -1.65 -1.26 -0.76 -0.75 -0.45 0.12 0.1 0.97 1.4 1.23 1.21 -1.37 -1.77 -2.21 -0.4 -0.12 0.29 -0.21 -4.5 -5.27 0.51 0.31 -1.2 0.37
0.76 -1.06 -1.01 -1.04 -1.72 -2.02 0.0 0.11 -0.1 0.84 1.11 1.2 1.07 -1.09 -2.28 -2.09 -0.12 -0.05 -0.26 0.1 -5.13 -3.43 1.33 0.52 0.28 -0.08
0.82 -0.74 -2.07 -1.74 -2.05 -1.71 0.27 0.3 0.1 0.96 1.54 1.1 1.12 -0.99 -2.05 -1.9 -0.58 -0.0 -0.35 0.27 -5.3 -1.37 0.95 0.23 -0.58 -0.0
-0.02 -0.01 -0.3 -0.47 -0.35 -0.31 -0.37 -0.55 -0.3 0.05 0.34 0.66 -0.1 -0.27 -0.65 0.81 0.06 -0.16 -0.37 -0.35 -0.18 0.31 0.78 1.14 -0.87 -0.94
0.3 -0.1 -0.45 -0.63 -0.54 -0.57 -0.2 -0.19 0.08 0.3 0.56 0.85 0.32 0.12 -0.44 0.69 0.15 -0.25 -0.16 -0.27 -0.38 -0.87 0.45 0.71 -0.77 -0.94
0.7 -0.0 -1.55 -2.36 -2.15 -0.66 -0.0 0.12 0.44 0.76 0.91 1.31 0.5 -2.04 -2.03 -1.68 -0.56 -0.12 -0.54 -0.29 -0.18 -1.91 0.86 1.46 0.02 -1.19
0.75 0.56 -1.22 -3.11 -3.04 -1.39 0.12 0.51 0.71 1.11 1.26 1.3 0.42 -3.24 -1.89 -2.01 -0.06 0.46 0.05 0.15 -0.42 -2.78 0.54 0.71 -2.68 -4.0
1.55 1.0 -0.77 -2.49 -2.71 -1.06 0.07 0.19 0.25 0.7 1.05 1.42 1.25 -3.8 -2.46 -3.71 -1.57 -0.38 -0.87 -0.9 -2.69 -4.45 0.99 1.07 -0.87 -2.22
1.5 0.79 -0.47 -1.84 -2.79 -1.48 -0.3 0.1 0.41 0.63 1.06 1.31 1.2 -2.92 -2.7 -4.13 -1.24 -0.85 -0.84 -0.76 -2.75 -2.6 1.44 1.01 -0.76 -2.15
0.58 0.24 -0.69 -1.15 -1.45 -0.81 -0.1 0.38 0.52 0.62 0.76 0.93 0.79 -1.8 -1.38 -1.9 -0.83 0.26 -0.2 -0.26 -0.29 -1.77 0.5 1.11 -0.22 -0.28
0.48 -0.38 -0.64 -0.49 -0.52 -0.43 -0.16 0.11 0.31 0.63 0.75 0.81 0.57 -1.53 -1.21 -0.61 -0.7 -0.69 -0.83 -0.6 -0.61 0.15 1.03 1.18 -0.28 -0.81
0.73 0.28 -0.36 -0.69 -0.99 -1.14 -0.37 -0.09 0.19 0.35 0.62 0.82 0.7 -0.66 -0.82 0.56 0.08 0.0 -0.36 -0.26 -0.87 -1.04 0.85 0.38 -0.54 -0.92
0.47 -0.11 -0.56 -0.74 -0.67 -0.44 -0.3 -0.21 0.1 0.32 0.71 0.98 0.79 0.66 -0.46 0.51 0.58 -0.77 -0.82 -0.65 -1.43 -1.16 0.01 0.35 -0.22 -0.42
0.61 0.6 -0.4 -1.04 -1.63 -0.95 -0.02 0.46 0.59 0.88 0.92 0.95 0.2 -2.1 -1.55 -1.29 -0.94 -0.19 -0.27 -0.3 0.13 -2.45 1.3 0.7 -0.92 -1.85
0.53 0.76 0.12 -0.72 -1.44 -1.58 -0.52 0.0 0.29 0.74 0.98 1.2 0.73 -1.24 -2.1 -0.33 0.18 -0.29 -0.8 -0.26 -0.53 -0.71 0.37 0.34 -0.49 -0.85
0.06 -0.2 -0.54 -0.73 -0.56 -0.37 -0.08 -0.07 0.15 0.46 0.5 0.61 0.23 0.05 -0.4 0.35 0.46 0.06 0.06 0.16 -1.1 -1.05 0.42 0.6 -0.66 -0.41
0.7 0.77 -0.07 -0.71 -1.09 -0.32 0.23 0.49 0.62 0.79 1.08 1.17 0.63 -6.07 -4.0 -4.67 -1.99 -0.57 -0.91 -0.72 -0.19 -2.53 1.38 0.89 -1.79 -3.08
0.05 -0.19 -0.49 -0.88 -0.98 -0.8 -0.83 -0.84 -0.34 0.19 0.46 0.85 0.03 -0.49 -1.1 0.35 0.58 -0.41 -0.37 -0.13 -0.93 0.2 1.07 1.43 -0.36 -0.19
0.24 -0.33 -0.5 -0.56 -0.94 -1.27 -0.88 -0.73 -0.01 0.55 1.01 1.28 0.5 -0.21 -0.95 0.63 0.64 -0.42 -0.25 -0.15 -3.02 -0.34 0.48 0.75 -0.47 -0.89
0.57 -0.17 -0.63 -0.54 -0.52 -0.63 -0.13 -0.06 -0.34 -0.2 0.28 0.95 0.72 -0.89 -1.05 0.26 0.05 -0.11 -0.84 -0.71 -0.84 -0.78 0.99 0.79 0.82 -0.62
0.85 0.03 -0.33 -0.43 -0.28 -0.16 -0.01 0.04 -0.07 -0.14 0.34 0.98 0.89 -0.67 -0.7 0.35 0.24 -0.5 -0.45 -0.51 -1.39 -1.11 0.42 0.39 0.15 -0.98
1.02 0.65 -0.6 -2.69 -3.95 -3.97 -1.7 0.16 0.66 1.04 1.42 1.36 0.75 -2.88 -0.77 -2.72 -1.15 0.39 0.12 -0.6 -0.52 -2.66 0.37 1.12 -0.79 -2.34
0.62 -0.47 -1.26 -2.26 -1.93 -1.26 -0.46 -0.54 0.06 0.64 1.08 1.32 1.19 0.09 -1.07 -1.35 -0.51 -0.2 -1.47 -1.53 0.61 -2.92 1.26 0.84 -0.65 -0.26
-1.3 -1.27 -1.34 -0.56 -0.24 -0.46 -0.15 -0.2 0.37 0.95 1.25 1.19 -1.22 0.26 -0.17 -0.49 -0.59 0.09 0.1 -0.07 -0.44 -0.37 0.38 0.58 -0.47 -0.19
0.19 -0.42 -0.58 -0.49 -0.2 -0.29 -0.22 -0.16 0.19 0.58 0.82 0.93 0.48 0.08 -0.31 0.12 -0.42 -0.16 0.02 -0.62 -0.39 -1.05 0.13 0.47 -0.51 -0.15
0.23 0.19 -0.2 -0.62 -0.73 -0.34 -0.12 0.05 0.33 0.41 0.55 0.69 0.29 -0.44 -0.57 0.41 -0.21 -0.2 -0.2 -0.31 -0.06 -0.73 0.63 0.62 -0.61 -1.05
0.97 0.07 -1.4 -2.74 -1.96 -0.55 0.08 0.21 0.51 0.9 1.06 1.46 0.69 -1.96 -2.14 -1.73 -0.52 -0.64 -0.7 -0.33 -0.16 -3.21 1.41 0.68 -0.93 -1.98
0.4 -0.16 -0.76 -1.21 -1.39 -1.2 -0.48 -0.3 0.15 0.69 1.11 1.25 0.63 0.1 -1.26 0.42 0.34 -0.98 -0.85 -0.61 -0.95 -0.77 0.61 1.05 -0.88 -0.8
0.06 -0.29 -0.86 -1.29 -1.6 -1.62 -0.57 -0.41 -0.05 0.62 0.91 1.11 0.4 0.24 -1.22 0.71 0.62 -0.51 -0.76 -0.48 -0.71 -0.6 0.83 1.08 -0.74 -0.58
0.58 0.17 -0.17 -0.73 -1.18 -0.95 -0.32 0.1 0.32 0.57 0.86 1.03 0.73 -0.89 -1.61 -0.37 -0.26 -0.65 -0.93 -0.5 -0.2 -1.1 0.88 0.74 0.09 -0.87
0.23 -0.01 -0.63 -1.17 -0.89 -0.4 0.22 0.36 0.46 0.72 0.79 0.88 0.46 -0.34 -0.36 0.48 0.22 0.16 -0.27 -0.24 -1.35 -1.76 -0.03 0.24 -0.18 -1.44
-1.08 -2.0 -0.66 -0.29 0.07 -0.33 -0.13 -1.07 0.34 0.57 0.71 1.28 -0.58 0.09 0.2 0.13 -0.9 -0.36 0.08 -0.29 0.55 -1.47 -0.24 1.02 -0.49 0.27
-0.79 -1.83 -2.56 -2.1 -1.79 -1.77 -0.84 -0.4 0.19 0.99 1.2 0.94 -0.33 0.76 -0.06 0.73 -1.29 0.48 -0.14 0.03 -0.05 -0.32 0.75 0.45 -0.13 -0.11
-0.22 -1.55 -2.06 -2.31 -2.13 -1.31 -0.5 -0.28 0.23 0.91 1.4 1.87 0.04 0.36 -1.27 0.35 -0.74 -0.82 -1.27 -0.96 -1.24 -1.57 1.08 1.3 -0.41 -0.59
-0.36 -1.69 -2.61 -2.79 -2.64 -2.12 -0.72 -0.59 -0.02 0.73 1.1 1.63 -0.37 0.46 -1.8 0.48 -0.66 -0.43 -1.3 -0.94 -0.98 -2.31 1.52 1.87 -0.08 -0.46
0.85 0.22 -0.53 -0.81 -1.77 -2.12 -0.99 -0.4 0.45 0.86 1.24 1.71 1.01 -2.25 -1.51 -0.84 -0.69 -0.55 -0.94 -0.96 -1.51 -0.81 0.96 0.78 -0.2 -2.05
-0.92 -0.98 -0.67 -0.63 -0.34 -0.72 -0.66 -0.59 0.22 0.6 0.9 1.37 -0.53 -0.23 -0.42 0.8 -0.06 -0.55 -0.64 -1.01 -0.11 -1.66 1.55 1.21 -2.62 -1.36
0.7 -0.2 -2.26 -3.07 -2.7 -1.35 0.04 0.22 0.54 0.9 1.13 1.36 0.6 -3.04 -2.33 -2.56 -1.09 -0.74 -0.88 -0.9 0.68 -2.55 1.47 1.59 -1.35 -1.88
-0.2 -1.82 -0.89 -1.2 -1.52 -1.49 -1.05 -0.58 0.25 0.86 0.85 0.95 0.31 0.19 -0.67 0.32 0.04 0.42 0.36 0.03 -0.66 -1.19 0.45 0.73 0.36 -0.05
0.16 -0.17 -0.36 -0.55 -0.51 -0.53 -0.24 -0.23 0.12 0.54 0.7 0.82 0.25 -0.01 -0.8 0.7 0.43 -0.33 -0.3 0.03 -1.77 -0.27 -0.28 0.85 -0.59 -0.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.