Coexpression cluster: Cluster_10 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 6.12% (3/49) 3.86 0.00116 0.017534
GO:0045182 translation regulator activity 4.08% (2/49) 5.33 0.001123 0.019094
GO:0008135 translation factor activity, RNA binding 4.08% (2/49) 5.33 0.001123 0.019094
GO:0090079 translation regulator activity, nucleic acid binding 4.08% (2/49) 5.33 0.001123 0.019094
GO:0034470 ncRNA processing 6.12% (3/49) 4.83 0.00016 0.021793
GO:0034660 ncRNA metabolic process 6.12% (3/49) 3.99 0.000893 0.024291
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 2.04% (1/49) 8.98 0.001984 0.024525
GO:0034457 Mpp10 complex 2.04% (1/49) 8.98 0.001984 0.024525
GO:1990904 ribonucleoprotein complex 4.08% (2/49) 5.59 0.00079 0.026867
GO:0016072 rRNA metabolic process 4.08% (2/49) 5.66 0.000716 0.032453
GO:0006364 rRNA processing 4.08% (2/49) 5.66 0.000716 0.032453
GO:0030688 preribosome, small subunit precursor 2.04% (1/49) 7.98 0.003963 0.044919
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Alsophila latebrosa HCCA Cluster_52 0.02 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_51 0.022 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_49 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_55 0.017 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_125 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_149 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_24 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_144 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_56 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_146 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_81 0.027 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_9 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_5 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_76 0.024 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_183 0.018 OrthoFinder output from all 47 species Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms