Coexpression cluster: Cluster_256 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004298 threonine-type endopeptidase activity 7.22% (7/97) 7.14 0.0 0.0
GO:0005839 proteasome core complex 7.22% (7/97) 7.14 0.0 0.0
GO:0070003 threonine-type peptidase activity 7.22% (7/97) 7.14 0.0 0.0
GO:0140535 intracellular protein-containing complex 7.22% (7/97) 6.06 0.0 0.0
GO:0051603 proteolysis involved in protein catabolic process 7.22% (7/97) 5.62 0.0 0.0
GO:1902494 catalytic complex 8.25% (8/97) 4.96 0.0 0.0
GO:0004175 endopeptidase activity 8.25% (8/97) 4.75 0.0 0.0
GO:0008233 peptidase activity 8.25% (8/97) 3.72 0.0 6e-06
GO:0032991 protein-containing complex 9.28% (9/97) 3.26 0.0 1.3e-05
GO:0006508 proteolysis 8.25% (8/97) 3.52 1e-06 1.3e-05
GO:0006807 nitrogen compound metabolic process 19.59% (19/97) 1.89 1e-06 1.6e-05
GO:0043170 macromolecule metabolic process 18.56% (18/97) 1.94 1e-06 1.8e-05
GO:1901564 organonitrogen compound metabolic process 17.53% (17/97) 1.95 2e-06 3.2e-05
GO:0008152 metabolic process 21.65% (21/97) 1.52 9e-06 0.000166
GO:0005575 cellular_component 14.43% (14/97) 1.99 1.1e-05 0.000176
GO:0019538 protein metabolic process 14.43% (14/97) 1.96 1.4e-05 0.000204
GO:0044271 cellular nitrogen compound biosynthetic process 7.22% (7/97) 3.18 1.4e-05 0.000207
GO:0003676 nucleic acid binding 12.37% (12/97) 2.12 2.1e-05 0.000285
GO:0044238 primary metabolic process 19.59% (19/97) 1.53 2.6e-05 0.000314
GO:0034641 cellular nitrogen compound metabolic process 9.28% (9/97) 2.55 2.6e-05 0.000329
GO:0019773 proteasome core complex, alpha-subunit complex 2.06% (2/97) 7.62 4.4e-05 0.000486
GO:0003690 double-stranded DNA binding 4.12% (4/97) 4.39 4.3e-05 0.000499
GO:0071704 organic substance metabolic process 19.59% (19/97) 1.46 4.9e-05 0.000519
GO:0044249 cellular biosynthetic process 8.25% (8/97) 2.59 5.9e-05 0.000596
GO:0016787 hydrolase activity 12.37% (12/97) 1.94 7e-05 0.000678
GO:0009059 macromolecule biosynthetic process 6.19% (6/97) 3.07 8.8e-05 0.000827
GO:0008150 biological_process 27.84% (27/97) 1.08 9.5e-05 0.000863
GO:1901576 organic substance biosynthetic process 8.25% (8/97) 2.47 0.000107 0.000932
GO:0009058 biosynthetic process 8.25% (8/97) 2.31 0.000219 0.001846
GO:0044237 cellular metabolic process 14.43% (14/97) 1.47 0.000486 0.003951
GO:0043043 peptide biosynthetic process 4.12% (4/97) 3.33 0.000708 0.005236
GO:0003735 structural constituent of ribosome 4.12% (4/97) 3.33 0.000708 0.005236
GO:0006412 translation 4.12% (4/97) 3.35 0.00067 0.005276
GO:0043604 amide biosynthetic process 4.12% (4/97) 3.31 0.000758 0.005282
GO:0044260 cellular macromolecule metabolic process 6.19% (6/97) 2.49 0.00074 0.005314
GO:0003723 RNA binding 4.12% (4/97) 3.28 0.000799 0.005415
GO:0043603 amide metabolic process 4.12% (4/97) 3.2 0.000992 0.006051
GO:0006518 peptide metabolic process 4.12% (4/97) 3.23 0.00092 0.00607
GO:1901566 organonitrogen compound biosynthetic process 5.15% (5/97) 2.73 0.000989 0.006189
GO:0005198 structural molecule activity 4.12% (4/97) 3.2 0.00098 0.006292
GO:0097159 organic cyclic compound binding 18.56% (18/97) 1.13 0.00129 0.007495
GO:1901363 heterocyclic compound binding 18.56% (18/97) 1.13 0.00129 0.007495
GO:0048229 gametophyte development 1.03% (1/97) 9.42 0.001456 0.008073
GO:0009555 pollen development 1.03% (1/97) 9.42 0.001456 0.008073
GO:0003674 molecular_function 38.14% (37/97) 0.65 0.001595 0.008646
GO:0031090 organelle membrane 2.06% (2/97) 4.9 0.002082 0.010584
GO:0034645 cellular macromolecule biosynthetic process 4.12% (4/97) 2.92 0.002015 0.01069
GO:0016070 RNA metabolic process 4.12% (4/97) 2.91 0.002076 0.010778
GO:0003743 translation initiation factor activity 2.06% (2/97) 4.78 0.002455 0.012225
GO:0034654 nucleobase-containing compound biosynthetic process 3.09% (3/97) 3.46 0.002642 0.012894
GO:0006418 tRNA aminoacylation for protein translation 2.06% (2/97) 4.67 0.002857 0.013669
GO:1901137 carbohydrate derivative biosynthetic process 2.06% (2/97) 4.57 0.003288 0.015427
GO:0004812 aminoacyl-tRNA ligase activity 2.06% (2/97) 4.47 0.003747 0.016039
GO:0043038 amino acid activation 2.06% (2/97) 4.47 0.003747 0.016039
GO:0043039 tRNA aminoacylation 2.06% (2/97) 4.47 0.003747 0.016039
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.06% (2/97) 4.47 0.003747 0.016039
GO:0006139 nucleobase-containing compound metabolic process 5.15% (5/97) 2.29 0.003742 0.017229
GO:0004140 dephospho-CoA kinase activity 1.03% (1/97) 7.84 0.004361 0.017444
GO:0090079 translation regulator activity, nucleic acid binding 2.06% (2/97) 4.36 0.00436 0.017732
GO:0008135 translation factor activity, RNA binding 2.06% (2/97) 4.36 0.00436 0.017732
GO:0045182 translation regulator activity 2.06% (2/97) 4.36 0.00436 0.017732
GO:0019941 modification-dependent protein catabolic process 2.06% (2/97) 4.29 0.004749 0.018106
GO:0043632 modification-dependent macromolecule catabolic process 2.06% (2/97) 4.29 0.004749 0.018106
GO:0006511 ubiquitin-dependent protein catabolic process 2.06% (2/97) 4.29 0.004749 0.018106
GO:0005730 nucleolus 1.03% (1/97) 7.42 0.00581 0.02116
GO:0001671 ATPase activator activity 1.03% (1/97) 7.42 0.00581 0.02116
GO:0046483 heterocycle metabolic process 5.15% (5/97) 2.12 0.006056 0.02173
GO:0018130 heterocycle biosynthetic process 3.09% (3/97) 3.05 0.005806 0.021794
GO:0140098 catalytic activity, acting on RNA 3.09% (3/97) 3.0 0.006472 0.022886
GO:0019438 aromatic compound biosynthetic process 3.09% (3/97) 2.96 0.006893 0.023688
GO:0140101 catalytic activity, acting on a tRNA 2.06% (2/97) 4.0 0.00708 0.023993
GO:0006725 cellular aromatic compound metabolic process 5.15% (5/97) 2.08 0.006884 0.023995
GO:0090304 nucleic acid metabolic process 4.12% (4/97) 2.39 0.007466 0.024955
GO:0097659 nucleic acid-templated transcription 2.06% (2/97) 3.9 0.008063 0.026231
GO:0006351 DNA-templated transcription 2.06% (2/97) 3.9 0.008063 0.026231
GO:1901360 organic cyclic compound metabolic process 5.15% (5/97) 2.0 0.008609 0.02728
GO:0043232 intracellular non-membrane-bounded organelle 3.09% (3/97) 2.83 0.008902 0.027493
GO:0043228 non-membrane-bounded organelle 3.09% (3/97) 2.83 0.008902 0.027493
GO:0006399 tRNA metabolic process 2.06% (2/97) 3.85 0.008576 0.027534
GO:0003824 catalytic activity 21.65% (21/97) 0.77 0.009248 0.028205
GO:0090407 organophosphate biosynthetic process 2.06% (2/97) 3.78 0.009463 0.028506
GO:0034030 ribonucleoside bisphosphate biosynthetic process 1.03% (1/97) 6.42 0.011588 0.032876
GO:0033866 nucleoside bisphosphate biosynthetic process 1.03% (1/97) 6.42 0.011588 0.032876
GO:0034033 purine nucleoside bisphosphate biosynthetic process 1.03% (1/97) 6.42 0.011588 0.032876
GO:0015937 coenzyme A biosynthetic process 1.03% (1/97) 6.42 0.011588 0.032876
GO:0016255 attachment of GPI anchor to protein 1.03% (1/97) 6.42 0.011588 0.032876
GO:1901362 organic cyclic compound biosynthetic process 3.09% (3/97) 2.66 0.012195 0.034202
GO:0042765 GPI-anchor transamidase complex 1.03% (1/97) 6.25 0.013027 0.035316
GO:0008303 caspase complex 1.03% (1/97) 6.25 0.013027 0.035316
GO:0003677 DNA binding 5.15% (5/97) 1.86 0.012757 0.035371
GO:0034660 ncRNA metabolic process 2.06% (2/97) 3.52 0.013395 0.035917
GO:0009987 cellular process 15.46% (15/97) 0.89 0.014082 0.036945
GO:1905369 endopeptidase complex 1.03% (1/97) 6.1 0.014464 0.037149
GO:0005852 eukaryotic translation initiation factor 3 complex 1.03% (1/97) 6.1 0.014464 0.037149
GO:0140640 catalytic activity, acting on a nucleic acid 3.09% (3/97) 2.58 0.01407 0.037317
GO:0032774 RNA biosynthetic process 2.06% (2/97) 3.41 0.015359 0.038635
GO:0044265 cellular macromolecule catabolic process 2.06% (2/97) 3.41 0.015359 0.038635
GO:0051087 chaperone binding 1.03% (1/97) 5.96 0.015898 0.039584
GO:0140096 catalytic activity, acting on a protein 8.25% (8/97) 1.3 0.016246 0.04004
GO:0008483 transaminase activity 1.03% (1/97) 5.72 0.018762 0.043599
GO:0006661 phosphatidylinositol biosynthetic process 1.03% (1/97) 5.72 0.018762 0.043599
GO:0006506 GPI anchor biosynthetic process 1.03% (1/97) 5.72 0.018762 0.043599
GO:0006505 GPI anchor metabolic process 1.03% (1/97) 5.72 0.018762 0.043599
GO:0006497 protein lipidation 1.03% (1/97) 5.72 0.018762 0.043599
GO:0016769 transferase activity, transferring nitrogenous groups 1.03% (1/97) 5.72 0.018762 0.043599
GO:0005741 mitochondrial outer membrane 1.03% (1/97) 5.62 0.020191 0.045616
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.03% (1/97) 5.62 0.020191 0.045616
GO:0031968 organelle outer membrane 1.03% (1/97) 5.62 0.020191 0.045616
GO:0005789 endoplasmic reticulum membrane 1.03% (1/97) 5.52 0.021618 0.048391
GO:0009057 macromolecule catabolic process 2.06% (2/97) 3.14 0.02193 0.048645
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_145 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_316 0.024 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_147 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_162 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_20 0.016 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_120 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_123 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_125 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_281 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_295 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_300 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_314 0.053 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_141 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_151 0.03 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_64 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_85 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_18 0.023 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_85 0.025 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_12 0.05 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_73 0.022 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.029 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_84 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_10 0.041 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_127 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_35 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_38 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_66 0.023 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_149 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_212 0.029 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_26 0.041 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_11 0.025 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_31 0.032 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_61 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_131 0.02 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_47 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_78 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_75 0.015 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_147 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_25 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.051 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_9 0.027 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_187 0.029 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_110 0.015 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_158 0.025 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_60 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_111 0.027 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_157 0.022 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_198 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_202 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_194 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_32 0.021 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_233 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_280 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_98 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_162 0.015 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_35 0.026 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_96 0.047 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_13 0.018 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_76 0.017 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_47 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_57 0.055 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_169 0.021 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_51 0.024 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_140 0.037 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_80 0.037 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_109 0.015 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_119 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_169 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_176 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_183 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_5 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_103 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_121 0.043 OrthoFinder output from all 47 species Compare
Sequences (97) (download table)

InterPro Domains

GO Terms

Family Terms