Coexpression cluster: Cluster_11 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009536 plastid 76.27% (45/59) 2.47 0.0 0.0
GO:0009507 chloroplast 72.88% (43/59) 2.43 0.0 0.0
GO:0009658 chloroplast organization 22.03% (13/59) 4.7 0.0 0.0
GO:0009657 plastid organization 23.73% (14/59) 4.44 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 42.37% (25/59) 2.18 0.0 0.0
GO:0046483 heterocycle metabolic process 44.07% (26/59) 2.03 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 44.07% (26/59) 1.98 0.0 0.0
GO:0090304 nucleic acid metabolic process 35.59% (21/59) 2.32 0.0 0.0
GO:0010020 chloroplast fission 8.47% (5/59) 6.95 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 44.07% (26/59) 1.89 0.0 0.0
GO:0043572 plastid fission 8.47% (5/59) 6.87 0.0 0.0
GO:0006996 organelle organization 28.81% (17/59) 2.64 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 44.07% (26/59) 1.82 0.0 0.0
GO:0016070 RNA metabolic process 28.81% (17/59) 2.53 0.0 0.0
GO:0016043 cellular component organization 35.59% (21/59) 2.06 0.0 0.0
GO:0009987 cellular process 71.19% (42/59) 1.0 0.0 1e-06
GO:0044237 cellular metabolic process 57.63% (34/59) 1.27 0.0 1e-06
GO:0071840 cellular component organization or biogenesis 35.59% (21/59) 1.93 0.0 1e-06
GO:0008152 metabolic process 62.71% (37/59) 1.14 0.0 1e-06
GO:0043227 membrane-bounded organelle 91.53% (54/59) 0.61 0.0 2e-06
GO:0043231 intracellular membrane-bounded organelle 91.53% (54/59) 0.61 0.0 2e-06
GO:0043226 organelle 91.53% (54/59) 0.59 0.0 3e-06
GO:0043229 intracellular organelle 91.53% (54/59) 0.59 0.0 3e-06
GO:0043621 protein self-association 6.78% (4/59) 6.29 0.0 4e-06
GO:0044238 primary metabolic process 54.24% (32/59) 1.23 0.0 5e-06
GO:0071704 organic substance metabolic process 57.63% (34/59) 1.13 0.0 7e-06
GO:0006807 nitrogen compound metabolic process 47.46% (28/59) 1.36 0.0 8e-06
GO:0009532 plastid stroma 16.95% (10/59) 2.99 0.0 8e-06
GO:0009570 chloroplast stroma 16.95% (10/59) 2.99 0.0 8e-06
GO:0140640 catalytic activity, acting on a nucleic acid 13.56% (8/59) 3.3 1e-06 2.5e-05
GO:0048285 organelle fission 8.47% (5/59) 4.62 2e-06 3.2e-05
GO:0043170 macromolecule metabolic process 42.37% (25/59) 1.38 2e-06 3.2e-05
GO:0006399 tRNA metabolic process 8.47% (5/59) 4.44 4e-06 5.7e-05
GO:0010027 thylakoid membrane organization 10.17% (6/59) 3.84 4e-06 6.1e-05
GO:0009668 plastid membrane organization 10.17% (6/59) 3.84 4e-06 6.1e-05
GO:0016556 mRNA modification 8.47% (5/59) 4.35 5e-06 7.1e-05
GO:0061024 membrane organization 10.17% (6/59) 3.74 6e-06 8.3e-05
GO:0034660 ncRNA metabolic process 13.56% (8/59) 2.97 8e-06 0.000108
GO:0045036 protein targeting to chloroplast 6.78% (4/59) 4.72 1.6e-05 0.000212
GO:0072598 protein localization to chloroplast 6.78% (4/59) 4.72 1.6e-05 0.000212
GO:0072596 establishment of protein localization to chloroplast 6.78% (4/59) 4.72 1.6e-05 0.000212
GO:0009941 chloroplast envelope 13.56% (8/59) 2.81 1.8e-05 0.000224
GO:0009526 plastid envelope 13.56% (8/59) 2.79 1.9e-05 0.000233
GO:0031969 chloroplast membrane 6.78% (4/59) 4.61 2.3e-05 0.000273
GO:0090407 organophosphate biosynthetic process 15.25% (9/59) 2.52 2.4e-05 0.000289
GO:0006396 RNA processing 15.25% (9/59) 2.44 3.8e-05 0.000445
GO:0031967 organelle envelope 13.56% (8/59) 2.64 4e-05 0.000447
GO:0031975 envelope 13.56% (8/59) 2.64 4e-05 0.000447
GO:0005984 disaccharide metabolic process 8.47% (5/59) 3.6 5.8e-05 0.000632
GO:0016226 iron-sulfur cluster assembly 6.78% (4/59) 4.24 6e-05 0.000633
GO:0031163 metallo-sulfur cluster assembly 6.78% (4/59) 4.24 6e-05 0.000633
GO:0009451 RNA modification 10.17% (6/59) 3.11 6.7e-05 0.000689
GO:0009311 oligosaccharide metabolic process 8.47% (5/59) 3.48 8.6e-05 0.00087
GO:0009706 chloroplast inner membrane 5.08% (3/59) 5.0 0.000115 0.001135
GO:0009528 plastid inner membrane 5.08% (3/59) 4.9 0.00014 0.001288
GO:0016787 hydrolase activity 22.03% (13/59) 1.7 0.000134 0.001297
GO:0019637 organophosphate metabolic process 16.95% (10/59) 2.04 0.000139 0.001301
GO:0003824 catalytic activity 45.76% (27/59) 0.96 0.000138 0.001312
GO:0016072 rRNA metabolic process 8.47% (5/59) 3.31 0.000152 0.001377
GO:0006220 pyrimidine nucleotide metabolic process 6.78% (4/59) 3.81 0.000195 0.001628
GO:0006221 pyrimidine nucleotide biosynthetic process 6.78% (4/59) 3.81 0.000195 0.001628
GO:0009220 pyrimidine ribonucleotide biosynthetic process 6.78% (4/59) 3.82 0.00019 0.001659
GO:0009218 pyrimidine ribonucleotide metabolic process 6.78% (4/59) 3.82 0.00019 0.001659
GO:0042170 plastid membrane 10.17% (6/59) 2.83 0.000194 0.001675
GO:1901135 carbohydrate derivative metabolic process 15.25% (9/59) 2.11 0.000214 0.001758
GO:0072528 pyrimidine-containing compound biosynthetic process 6.78% (4/59) 3.74 0.000231 0.001839
GO:0018130 heterocycle biosynthetic process 15.25% (9/59) 2.1 0.000227 0.001839
GO:0044249 cellular biosynthetic process 28.81% (17/59) 1.31 0.000272 0.002103
GO:0019438 aromatic compound biosynthetic process 16.95% (10/59) 1.92 0.000268 0.002106
GO:0008252 nucleotidase activity 3.39% (2/59) 6.29 0.000291 0.002222
GO:0034654 nucleobase-containing compound biosynthetic process 11.86% (7/59) 2.44 0.000298 0.002241
GO:0048481 plant ovule development 6.78% (4/59) 3.63 0.000308 0.002283
GO:0000023 maltose metabolic process 6.78% (4/59) 3.62 0.000316 0.002309
GO:0072527 pyrimidine-containing compound metabolic process 6.78% (4/59) 3.62 0.000324 0.002335
GO:0009165 nucleotide biosynthetic process 8.47% (5/59) 3.07 0.000329 0.002341
GO:1901293 nucleoside phosphate biosynthetic process 8.47% (5/59) 3.06 0.000334 0.002348
GO:0031425 chloroplast RNA processing 3.39% (2/59) 6.17 0.000344 0.002354
GO:0006265 DNA topological change 3.39% (2/59) 6.17 0.000344 0.002354
GO:1901576 organic substance biosynthetic process 30.51% (18/59) 1.22 0.000377 0.002551
GO:0003916 DNA topoisomerase activity 3.39% (2/59) 6.07 0.000401 0.002674
GO:0045037 protein import into chloroplast stroma 3.39% (2/59) 5.87 0.000527 0.003472
GO:0009260 ribonucleotide biosynthetic process 6.78% (4/59) 3.4 0.000573 0.003686
GO:0046390 ribose phosphate biosynthetic process 6.78% (4/59) 3.4 0.000573 0.003686
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.78% (4/59) 3.37 0.00061 0.003878
GO:0009058 biosynthetic process 30.51% (18/59) 1.15 0.000663 0.004166
GO:0019252 starch biosynthetic process 6.78% (4/59) 3.33 0.000689 0.004279
GO:0022607 cellular component assembly 11.86% (7/59) 2.2 0.000783 0.004809
GO:0016071 mRNA metabolic process 8.47% (5/59) 2.77 0.000835 0.005069
GO:0009793 embryo development ending in seed dormancy 10.17% (6/59) 2.41 0.000901 0.005343
GO:0009790 embryo development 10.17% (6/59) 2.41 0.000901 0.005343
GO:0044271 cellular nitrogen compound biosynthetic process 15.25% (9/59) 1.79 0.001033 0.005996
GO:0016853 isomerase activity 6.78% (4/59) 3.17 0.001024 0.006008
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.78% (4/59) 3.16 0.001061 0.006026
GO:0016462 pyrophosphatase activity 6.78% (4/59) 3.16 0.001061 0.006026
GO:1901362 organic cyclic compound biosynthetic process 16.95% (10/59) 1.66 0.001088 0.006114
GO:0005739 mitochondrion 27.12% (16/59) 1.19 0.001143 0.006294
GO:0016817 hydrolase activity, acting on acid anhydrides 6.78% (4/59) 3.13 0.001137 0.006326
GO:0071103 DNA conformation change 3.39% (2/59) 5.29 0.001198 0.006529
GO:0051644 plastid localization 5.08% (3/59) 3.76 0.001441 0.00733
GO:0019750 chloroplast localization 5.08% (3/59) 3.76 0.001441 0.00733
GO:0009902 chloroplast relocation 5.08% (3/59) 3.77 0.001402 0.007412
GO:0051667 establishment of plastid localization 5.08% (3/59) 3.77 0.001402 0.007412
GO:0019682 glyceraldehyde-3-phosphate metabolic process 6.78% (4/59) 3.04 0.001436 0.007444
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 6.78% (4/59) 3.04 0.001436 0.007444
GO:0140098 catalytic activity, acting on RNA 6.78% (4/59) 3.01 0.00153 0.007497
GO:0046490 isopentenyl diphosphate metabolic process 6.78% (4/59) 3.01 0.00153 0.007497
GO:0009240 isopentenyl diphosphate biosynthetic process 6.78% (4/59) 3.01 0.00153 0.007497
GO:0005982 starch metabolic process 6.78% (4/59) 3.05 0.00139 0.007499
GO:0006364 rRNA processing 6.78% (4/59) 3.01 0.001555 0.007547
GO:0051656 establishment of organelle localization 5.08% (3/59) 3.73 0.001522 0.007669
GO:0034470 ncRNA processing 8.47% (5/59) 2.55 0.001629 0.007835
GO:0140097 catalytic activity, acting on DNA 5.08% (3/59) 3.69 0.001649 0.007863
GO:0035639 purine ribonucleoside triphosphate binding 10.17% (6/59) 2.24 0.001686 0.007968
GO:0032555 purine ribonucleotide binding 10.17% (6/59) 2.21 0.001864 0.008731
GO:0071806 protein transmembrane transport 5.08% (3/59) 3.61 0.001922 0.008773
GO:0065002 intracellular protein transmembrane transport 5.08% (3/59) 3.61 0.001922 0.008773
GO:0006796 phosphate-containing compound metabolic process 16.95% (10/59) 1.55 0.001901 0.008828
GO:0032553 ribonucleotide binding 10.17% (6/59) 2.19 0.001958 0.008861
GO:0042794 plastid rRNA transcription 1.69% (1/59) 8.87 0.002133 0.00897
GO:0010006 Toc complex 1.69% (1/59) 8.87 0.002133 0.00897
GO:0070180 large ribosomal subunit rRNA binding 1.69% (1/59) 8.87 0.002133 0.00897
GO:0009974 zeinoxanthin epsilon hydroxylase activity 1.69% (1/59) 8.87 0.002133 0.00897
GO:0035452 extrinsic component of plastid membrane 1.69% (1/59) 8.87 0.002133 0.00897
GO:0072374 carotene epsilon hydroxylase activity 1.69% (1/59) 8.87 0.002133 0.00897
GO:0017076 purine nucleotide binding 10.17% (6/59) 2.18 0.002056 0.009225
GO:0006793 phosphorus metabolic process 16.95% (10/59) 1.53 0.002103 0.009356
GO:0097367 carbohydrate derivative binding 10.17% (6/59) 2.17 0.002123 0.009369
GO:0005524 ATP binding 8.47% (5/59) 2.41 0.002489 0.010382
GO:0007275 multicellular organism development 11.86% (7/59) 1.91 0.002544 0.010533
GO:0019866 organelle inner membrane 5.08% (3/59) 3.45 0.002664 0.010943
GO:0046351 disaccharide biosynthetic process 3.39% (2/59) 4.7 0.002691 0.010967
GO:0032559 adenyl ribonucleotide binding 8.47% (5/59) 2.37 0.002793 0.0113
GO:0008150 biological_process 89.83% (53/59) 0.27 0.002908 0.011674
GO:0043168 anion binding 10.17% (6/59) 2.08 0.002932 0.011685
GO:0009250 glucan biosynthetic process 6.78% (4/59) 2.73 0.003102 0.012179
GO:0030554 adenyl nucleotide binding 8.47% (5/59) 2.34 0.003096 0.012244
GO:0044281 small molecule metabolic process 22.03% (13/59) 1.18 0.003715 0.014479
GO:0003924 GTPase activity 3.39% (2/59) 4.41 0.003996 0.015463
GO:0080085 signal recognition particle, chloroplast targeting 1.69% (1/59) 7.87 0.004262 0.015697
GO:0046608 carotenoid isomerase activity 1.69% (1/59) 7.87 0.004262 0.015697
GO:0004825 methionine-tRNA ligase activity 1.69% (1/59) 7.87 0.004262 0.015697
GO:1900871 chloroplast mRNA modification 1.69% (1/59) 7.87 0.004262 0.015697
GO:0033259 plastid DNA replication 1.69% (1/59) 7.87 0.004262 0.015697
GO:0033258 plastid DNA metabolic process 1.69% (1/59) 7.87 0.004262 0.015697
GO:0006264 mitochondrial DNA replication 1.69% (1/59) 7.87 0.004262 0.015697
GO:0043039 tRNA aminoacylation 3.39% (2/59) 4.32 0.004548 0.01619
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.39% (2/59) 4.32 0.004548 0.01619
GO:0006418 tRNA aminoacylation for protein translation 3.39% (2/59) 4.32 0.004548 0.01619
GO:0043038 amino acid activation 3.39% (2/59) 4.32 0.004548 0.01619
GO:0004812 aminoacyl-tRNA ligase activity 3.39% (2/59) 4.32 0.004548 0.01619
GO:0034637 cellular carbohydrate biosynthetic process 8.47% (5/59) 2.2 0.00462 0.016338
GO:0009312 oligosaccharide biosynthetic process 3.39% (2/59) 4.29 0.004739 0.016649
GO:0006081 cellular aldehyde metabolic process 6.78% (4/59) 2.52 0.005184 0.018094
GO:1901137 carbohydrate derivative biosynthetic process 6.78% (4/59) 2.52 0.005297 0.018367
GO:0042550 photosystem I stabilization 1.69% (1/59) 7.29 0.006387 0.020301
GO:0080158 obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis 1.69% (1/59) 7.29 0.006387 0.020301
GO:0009303 rRNA transcription 1.69% (1/59) 7.29 0.006387 0.020301
GO:0008253 5'-nucleotidase activity 1.69% (1/59) 7.29 0.006387 0.020301
GO:0032042 mitochondrial DNA metabolic process 1.69% (1/59) 7.29 0.006387 0.020301
GO:0019388 galactose catabolic process 1.69% (1/59) 7.29 0.006387 0.020301
GO:0004412 homoserine dehydrogenase activity 1.69% (1/59) 7.29 0.006387 0.020301
GO:0031357 obsolete integral component of chloroplast inner membrane 1.69% (1/59) 7.29 0.006387 0.020301
GO:0032365 intracellular lipid transport 1.69% (1/59) 7.29 0.006387 0.020301
GO:0031304 obsolete intrinsic component of mitochondrial inner membrane 1.69% (1/59) 7.29 0.006387 0.020301
GO:0009662 etioplast organization 1.69% (1/59) 7.29 0.006387 0.020301
GO:0008237 metallopeptidase activity 3.39% (2/59) 4.12 0.005963 0.020543
GO:1901566 organonitrogen compound biosynthetic process 13.56% (8/59) 1.51 0.006629 0.020947
GO:0010207 photosystem II assembly 5.08% (3/59) 3.0 0.006344 0.021578
GO:0051640 organelle localization 5.08% (3/59) 3.0 0.006344 0.021578
GO:0031090 organelle membrane 11.86% (7/59) 1.64 0.006956 0.02185
GO:0005488 binding 35.59% (21/59) 0.75 0.007281 0.022737
GO:0031968 organelle outer membrane 6.78% (4/59) 2.37 0.007463 0.023036
GO:0019867 outer membrane 6.78% (4/59) 2.37 0.007463 0.023036
GO:0004072 aspartate kinase activity 1.69% (1/59) 6.87 0.008507 0.024823
GO:0019255 glucose 1-phosphate metabolic process 1.69% (1/59) 6.87 0.008507 0.024823
GO:0004614 phosphoglucomutase activity 1.69% (1/59) 6.87 0.008507 0.024823
GO:1901259 chloroplast rRNA processing 1.69% (1/59) 6.87 0.008507 0.024823
GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition 1.69% (1/59) 6.87 0.008507 0.024823
GO:1900865 chloroplast RNA modification 1.69% (1/59) 6.87 0.008507 0.024823
GO:0050307 sucrose-phosphate phosphatase activity 1.69% (1/59) 6.87 0.008507 0.024823
GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity 1.69% (1/59) 6.87 0.008507 0.024823
GO:0006073 cellular glucan metabolic process 6.78% (4/59) 2.33 0.008273 0.025243
GO:0044042 glucan metabolic process 6.78% (4/59) 2.33 0.008273 0.025243
GO:0007020 microtubule nucleation 3.39% (2/59) 3.83 0.008793 0.025518
GO:0036094 small molecule binding 11.86% (7/59) 1.57 0.008953 0.025843
GO:0000166 nucleotide binding 10.17% (6/59) 1.74 0.009057 0.025863
GO:1901265 nucleoside phosphate binding 10.17% (6/59) 1.74 0.009057 0.025863
GO:0008654 phospholipid biosynthetic process 6.78% (4/59) 2.28 0.009384 0.026654
GO:0009590 detection of gravity 1.69% (1/59) 6.55 0.010622 0.029089
GO:0031897 Tic complex 1.69% (1/59) 6.55 0.010622 0.029089
GO:0008312 7S RNA binding 1.69% (1/59) 6.55 0.010622 0.029089
GO:0098781 ncRNA transcription 1.69% (1/59) 6.55 0.010622 0.029089
GO:0019843 rRNA binding 1.69% (1/59) 6.55 0.010622 0.029089
GO:0009534 chloroplast thylakoid 5.08% (3/59) 2.73 0.010536 0.029612
GO:0031976 plastid thylakoid 5.08% (3/59) 2.73 0.010536 0.029612
GO:0051649 establishment of localization in cell 11.86% (7/59) 1.51 0.011 0.029969
GO:0006644 phospholipid metabolic process 6.78% (4/59) 2.2 0.011226 0.030431
GO:0003723 RNA binding 6.78% (4/59) 2.19 0.011413 0.030781
GO:0006090 pyruvate metabolic process 6.78% (4/59) 2.18 0.011889 0.031903
GO:0044262 cellular carbohydrate metabolic process 8.47% (5/59) 1.86 0.01208 0.032255
GO:0019202 amino acid kinase activity 1.69% (1/59) 6.29 0.012734 0.033332
GO:0017038 protein import 1.69% (1/59) 6.29 0.012734 0.033332
GO:0045038 protein import into chloroplast thylakoid membrane 1.69% (1/59) 6.29 0.012734 0.033332
GO:0005048 signal sequence binding 1.69% (1/59) 6.29 0.012734 0.033332
GO:0140101 catalytic activity, acting on a tRNA 3.39% (2/59) 3.53 0.013013 0.033898
GO:0110165 cellular anatomical entity 94.92% (56/59) 0.17 0.013332 0.034559
GO:0046148 pigment biosynthetic process 5.08% (3/59) 2.6 0.013418 0.034615
GO:0003676 nucleic acid binding 16.95% (10/59) 1.15 0.013504 0.03467
GO:0048856 anatomical structure development 15.25% (9/59) 1.22 0.014168 0.036198
GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex 1.69% (1/59) 6.07 0.01484 0.037737
GO:0019693 ribose phosphate metabolic process 6.78% (4/59) 2.07 0.015237 0.038381
GO:0009259 ribonucleotide metabolic process 6.78% (4/59) 2.07 0.015237 0.038381
GO:0004556 alpha-amylase activity 1.69% (1/59) 5.87 0.016943 0.041502
GO:0031359 obsolete integral component of chloroplast outer membrane 1.69% (1/59) 5.87 0.016943 0.041502
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 1.69% (1/59) 5.87 0.016943 0.041502
GO:0031312 extrinsic component of organelle membrane 1.69% (1/59) 5.87 0.016943 0.041502
GO:0042372 phylloquinone biosynthetic process 1.69% (1/59) 5.87 0.016943 0.041502
GO:0042374 phylloquinone metabolic process 1.69% (1/59) 5.87 0.016943 0.041502
GO:0006790 sulfur compound metabolic process 8.47% (5/59) 1.73 0.01714 0.041795
GO:0072594 establishment of protein localization to organelle 6.78% (4/59) 2.01 0.017605 0.042732
GO:0033365 protein localization to organelle 6.78% (4/59) 2.0 0.017979 0.043442
GO:0065003 protein-containing complex assembly 6.78% (4/59) 1.99 0.018231 0.043853
GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity 1.69% (1/59) 5.7 0.019041 0.0444
GO:0042371 vitamin K biosynthetic process 1.69% (1/59) 5.7 0.019041 0.0444
GO:0042373 vitamin K metabolic process 1.69% (1/59) 5.7 0.019041 0.0444
GO:0006268 DNA unwinding involved in DNA replication 1.69% (1/59) 5.7 0.019041 0.0444
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 1.69% (1/59) 5.7 0.019041 0.0444
GO:0033692 cellular polysaccharide biosynthetic process 6.78% (4/59) 1.98 0.018613 0.044571
GO:1901363 heterocyclic compound binding 20.34% (12/59) 0.95 0.018913 0.045088
GO:0097159 organic cyclic compound binding 20.34% (12/59) 0.94 0.019811 0.045404
GO:0043933 protein-containing complex organization 6.78% (4/59) 1.95 0.01979 0.04555
GO:0016109 tetraterpenoid biosynthetic process 3.39% (2/59) 3.21 0.01974 0.045632
GO:0016117 carotenoid biosynthetic process 3.39% (2/59) 3.21 0.01974 0.045632
GO:0016791 phosphatase activity 5.08% (3/59) 2.38 0.020023 0.045693
GO:0005786 signal recognition particle, endoplasmic reticulum targeting 1.69% (1/59) 5.55 0.021134 0.047619
GO:0050308 sugar-phosphatase activity 1.69% (1/59) 5.55 0.021134 0.047619
GO:0016868 intramolecular transferase activity, phosphotransferases 1.69% (1/59) 5.55 0.021134 0.047619
GO:0016108 tetraterpenoid metabolic process 3.39% (2/59) 3.14 0.021606 0.048073
GO:0016116 carotenoid metabolic process 3.39% (2/59) 3.14 0.021606 0.048073
GO:0009117 nucleotide metabolic process 8.47% (5/59) 1.65 0.02153 0.048307
GO:0006753 nucleoside phosphate metabolic process 8.47% (5/59) 1.64 0.021861 0.04844
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_56 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_66 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_128 0.023 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_143 0.028 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_144 0.021 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_163 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_57 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_281 0.026 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_315 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_320 0.02 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_45 0.015 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_94 0.02 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_126 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_6 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_9 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_24 0.033 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_46 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_71 0.033 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_90 0.029 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_91 0.029 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_113 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_9 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_42 0.022 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_89 0.025 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_108 0.025 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_124 0.031 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_132 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_5 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_7 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_39 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_76 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_197 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_199 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_215 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_19 0.022 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.02 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_51 0.037 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_111 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_289 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_9 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_25 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_48 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_65 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_66 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_89 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_100 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_105 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_108 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_133 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_140 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_156 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_88 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_101 0.056 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_102 0.027 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_113 0.022 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_168 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_8 0.021 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_9 0.029 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_32 0.035 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_44 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_220 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_279 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_43 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_71 0.033 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_67 0.028 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_3 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_9 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_22 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_23 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_38 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_60 0.037 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_82 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_111 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_114 0.028 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_142 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_149 0.102 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_155 0.024 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_33 0.024 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_102 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_116 0.035 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_120 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_130 0.022 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_59 0.033 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_149 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_163 0.029 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_168 0.06 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_178 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_195 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_208 0.024 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_8 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_20 0.017 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_25 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_47 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.026 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_140 0.026 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_151 0.03 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_169 0.02 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_185 0.024 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_192 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_211 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_3 0.028 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_37 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_53 0.024 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_84 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_100 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_94 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_135 0.042 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_165 0.032 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_12 0.039 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_14 0.032 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_40 0.022 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_117 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_39 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_60 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_124 0.029 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_133 0.021 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_142 0.025 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_17 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_31 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_49 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_54 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_60 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_126 0.033 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_158 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_166 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_50 0.034 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_7 0.028 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_30 0.021 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_40 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_55 0.023 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_165 0.037 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_6 0.057 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_98 0.027 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_111 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_114 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_116 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_127 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_130 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_136 0.023 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_152 0.052 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_11 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_61 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_88 0.059 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_128 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_19 0.05 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_100 0.027 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_128 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_207 0.021 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_247 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_88 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_233 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_274 0.057 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_4 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_30 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_90 0.025 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_94 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_108 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_116 0.036 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_127 0.024 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_139 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_83 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_146 0.022 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_148 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_222 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_255 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_260 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_279 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_6 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_55 0.025 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_115 0.031 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_9 0.026 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_25 0.021 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_32 0.024 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_34 0.021 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_42 0.025 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_45 0.025 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_50 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.015 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_57 0.027 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_8 0.039 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_32 0.032 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_76 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_81 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_88 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.037 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_153 0.045 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_10 0.018 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_37 0.049 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_66 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_90 0.034 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_13 0.04 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_38 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_41 0.042 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_43 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.024 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_66 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_84 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_185 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_194 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_200 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_15 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_139 0.023 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_154 0.021 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_172 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_178 0.026 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_179 0.023 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_44 0.064 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_105 0.029 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_11 0.08 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_28 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.027 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_124 0.023 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_65 0.023 OrthoFinder output from all 47 species Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms