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GO:0016071: mRNA metabolic process (Biological process)

"The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes." [ISBN:0198506732]


There are 24792 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_250 Amborella trichopoda 2.27 % 0.005384 0.046423
Cluster_256 Amborella trichopoda 2.9 % 0.003349 0.049677
Cluster_192 Amborella trichopoda 1.74 % 0.000186 0.001207
Cluster_117 Arabidopsis thaliana 7.81 % 5e-06 3.1e-05
Cluster_238 Arabidopsis thaliana 16.16 % 0.0 0.0
Cluster_215 Arabidopsis thaliana 11.02 % 0.0 0.0
Cluster_241 Arabidopsis thaliana 11.54 % 4.5e-05 0.005243
Cluster_141 Arabidopsis thaliana 13.48 % 0.0 0.0
Cluster_185 Arabidopsis thaliana 13.48 % 0.0 0.0
Cluster_137 Arabidopsis thaliana 4.48 % 0.006733 0.04806
Cluster_177 Arabidopsis thaliana 12.68 % 0.0 2e-06
Cluster_11 Arabidopsis thaliana 7.23 % 0.000599 0.004927
Cluster_6 Arabidopsis thaliana 8.33 % 8.6e-05 0.012722
Cluster_200 Arabidopsis thaliana 7.94 % 0.001126 0.011111
Cluster_18 Arabidopsis thaliana 5.94 % 0.001669 0.044884
Cluster_217 Arabidopsis thaliana 8.99 % 1.6e-05 0.000541
Cluster_202 Arabidopsis thaliana 9.09 % 0.002158 0.013804
Cluster_134 Arabidopsis thaliana 10.53 % 5e-06 3e-05
Cluster_186 Arabidopsis thaliana 9.09 % 0.0 0.0
Cluster_182 Arabidopsis thaliana 11.59 % 2e-06 1.3e-05
Cluster_164 Chlamydomonas reinhardtii 1.46 % 0.013469 0.04806
Cluster_75 Chlamydomonas reinhardtii 3.57 % 0.0 1e-05
Cluster_138 Chlamydomonas reinhardtii 3.15 % 2e-05 0.001153
Cluster_124 Cyanophora paradoxa 1.37 % 0.000935 0.022244
Cluster_389 Gingko biloba 33.33 % 0.003192 0.028729
Cluster_41 Gingko biloba 2.03 % 5.9e-05 0.000603
Cluster_587 Gingko biloba 25.0 % 0.004254 0.008007
Cluster_100 Marchantia polymorpha 4.76 % 0.002898 0.024407
Cluster_139 Marchantia polymorpha 4.35 % 0.003467 0.036134
Cluster_165 Marchantia polymorpha 3.23 % 0.006215 0.042174
Cluster_91 Marchantia polymorpha 3.39 % 0.005644 0.041199
Cluster_71 Marchantia polymorpha 6.78 % 5e-06 6.2e-05
Cluster_204 Oryza sativa 1.72 % 0.000978 0.005179
Cluster_105 Oryza sativa 1.79 % 0.006984 0.03889
Cluster_340 Oryza sativa 3.85 % 0.001554 0.00991
Cluster_280 Oryza sativa 3.23 % 0.002201 0.042006
Cluster_121 Oryza sativa 1.01 % 0.020822 0.02693
Cluster_744 Oryza sativa 50.0 % 0.002227 0.020042
Cluster_688 Oryza sativa 50.0 % 0.002227 0.027836
Cluster_320 Oryza sativa 2.67 % 0.003201 0.018767
Cluster_146 Oryza sativa 3.17 % 0.002272 0.013414
Cluster_295 Physcomitrella patens 1.64 % 0.01679 0.043529
Cluster_64 Selaginella moellendorffii 1.15 % 0.01872 0.047839
Cluster_82 Selaginella moellendorffii 1.49 % 0.001828 0.013564
Cluster_19 Solanum lycopersicum 1.21 % 0.007861 0.025373
Cluster_204 Solanum lycopersicum 9.62 % 0.0 0.0
Cluster_105 Solanum lycopersicum 3.75 % 0.000316 0.015789
Cluster_265 Solanum lycopersicum 1.89 % 0.013234 0.049716
Cluster_237 Solanum lycopersicum 2.0 % 0.011845 0.029287
Cluster_47 Solanum lycopersicum 2.31 % 0.001298 0.013029
Cluster_508 Solanum lycopersicum 50.0 % 0.003284 0.013547
Cluster_74 Solanum lycopersicum 2.41 % 0.000164 0.004445
Cluster_119 Vitis vinifera 1.74 % 0.00141 0.030215
Cluster_75 Vitis vinifera 1.73 % 0.001434 0.01658
Cluster_158 Vitis vinifera 2.35 % 0.005397 0.046015
Cluster_260 Zea mays 2.22 % 0.000587 0.006791
Cluster_137 Zea mays 1.21 % 0.003304 0.013734
Cluster_285 Zea mays 1.29 % 0.015047 0.034025
Cluster_353 Zea mays 1.92 % 0.00702 0.026731
Cluster_189 Zea mays 2.3 % 0.004968 0.037403
Cluster_163 Zea mays 1.57 % 0.000251 0.001826
Cluster_354 Zea mays 5.33 % 2e-06 0.000465
Cluster_1142 Picea abies 25.0 % 0.002998 0.03448
Cluster_292 Picea abies 2.44 % 0.001764 0.013968
Cluster_1175 Picea abies 33.33 % 0.00225 0.020246
Cluster_241 Picea abies 1.57 % 4.1e-05 0.000421
Cluster_153 Abrodictyum obscurum 1.89 % 0.005713 0.046203
Cluster_150 Abrodictyum obscurum 2.7 % 0.002833 0.011865
Cluster_526 Abrodictyum obscurum 11.11 % 0.009509 0.033283
Cluster_176 Abrodictyum obscurum 2.17 % 0.004338 0.045631
Cluster_92 Adiantum latifolium 0.95 % 0.013374 0.038432
Cluster_952 Alsophila latebrosa 50.0 % 0.001742 0.00491
Cluster_380 Alsophila latebrosa 1.75 % 0.000463 0.011401
Cluster_443 Alsophila latebrosa 3.57 % 0.001115 0.010234
Cluster_414 Amblovenatum opulentum 1.72 % 0.007055 0.040844
Cluster_567 Amblovenatum opulentum 1.96 % 0.000626 0.027443
Cluster_629 Amblovenatum opulentum 7.55 % 0.0 2.9e-05
Cluster_456 Amblovenatum opulentum 1.2 % 0.013993 0.043213
Cluster_214 Amblovenatum opulentum 1.69 % 0.00097 0.034715
Cluster_171 Amblovenatum opulentum 1.38 % 0.010823 0.023614
Cluster_176 Amblovenatum opulentum 2.17 % 0.004502 0.040909
Cluster_292 Angiopteris evecta 1.27 % 0.00642 0.031185
Cluster_60 Angiopteris evecta 1.52 % 0.004588 0.006914
Cluster_468 Angiopteris evecta 1.23 % 0.006821 0.025041
Cluster_326 Angiopteris evecta 1.31 % 0.000715 0.017411
Cluster_371 Davallia denticulata 2.82 % 0.002367 0.033273
Cluster_483 Davallia denticulata 5.36 % 2.6e-05 0.005437
Cluster_200 Davallia denticulata 3.12 % 0.001929 0.024559
Cluster_226 Equisetum hyemale 2.13 % 0.006045 0.021158
Cluster_608 Lindsaea ensifolia 4.08 % 0.000689 0.004594
Cluster_559 Lindsaea ensifolia 3.03 % 0.001246 0.046533
Cluster_469 Nephrolepis biserrata 2.47 % 0.001618 0.032544
Cluster_390 Nephrolepis biserrata 4.0 % 0.000621 0.005986
Cluster_782 Pleocnemia irregularis 50.0 % 0.002545 0.008589
Cluster_591 Pleocnemia irregularis 3.7 % 0.000158 0.004654
Cluster_704 Pleocnemia irregularis 9.09 % 0.013917 0.046034
Cluster_600 Pleocnemia irregularis 3.23 % 0.002883 0.041318
Cluster_596 Pleocnemia irregularis 3.28 % 0.002792 0.037412
Cluster_615 Pleocnemia irregularis 5.0 % 6.5e-05 0.003072
Cluster_202 Pleocnemia irregularis 2.82 % 0.00376 0.034781
Cluster_211 Salvinia molesta 1.32 % 0.001392 0.025138
Cluster_525 Salvinia molesta 1.1 % 0.013173 0.047267
Cluster_441 Salvinia molesta 2.6 % 0.002521 0.020387
Cluster_559 Salvinia molesta 1.96 % 0.004371 0.04493
Cluster_309 Salvinia molesta 1.42 % 0.00113 0.006741
Cluster_181 Salvinia molesta 2.79 % 1e-06 1.7e-05
Cluster_114 Salvinia molesta 1.46 % 0.001026 0.01572
Cluster_367 Tectaria incisa 2.2 % 0.002279 0.011174
Cluster_528 Tectaria incisa 33.33 % 0.002318 0.025495
Cluster_424 Tectaria incisa 1.94 % 0.002907 0.018329
Cluster_351 Diplazium proliferum (Lam.) Kaulf. 5.77 % 1e-05 8.5e-05
Cluster_638 Pyrrosia piloselloides 2.9 % 0.001502 0.022528
Cluster_175 Pyrrosia piloselloides 2.08 % 0.002878 0.019639
Cluster_274 Pyrrosia piloselloides 2.44 % 0.002112 0.023931
Cluster_118 Ophioglossum reticulatum 1.61 % 0.001202 0.009485
Cluster_337 Ophioglossum reticulatum 2.35 % 4.1e-05 0.009242
Cluster_332 Ophioglossum reticulatum 3.75 % 0.000102 0.001616
Cluster_115 Stenochlaena palustris 2.38 % 0.002876 0.027446
Cluster_320 Stenochlaena palustris 2.27 % 0.003151 0.020565
Cluster_77 Dicranopteris curranii 0.86 % 0.014518 0.035271
Cluster_57 Dicranopteris curranii 0.97 % 0.011696 0.044657
Cluster_451 Dicranopteris curranii 2.2 % 0.00238 0.030522
Cluster_459 Dicranopteris curranii 1.89 % 0.00321 0.033524
Cluster_321 Dicranopteris curranii 1.94 % 0.000255 0.001597
Cluster_227 Dicranopteris curranii 2.53 % 0.001801 0.009988
Cluster_249 Alsophila spinulosa 3.7 % 0.000932 0.013568
Cluster_252 Alsophila spinulosa 1.7 % 0.000431 0.014769
Cluster_220 Lygodium flexuosum 2.46 % 5e-06 0.000129
Cluster_407 Lygodium flexuosum 4.0 % 0.001763 0.014839
Cluster_144 Lygodium flexuosum 2.13 % 0.006077 0.040651
Cluster_281 Lygodium flexuosum 1.6 % 0.001621 0.007928
Sequences (24792) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !