Coexpression cluster: Cluster_19 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043039 tRNA aminoacylation 3.26% (3/92) 5.13 9.1e-05 0.003859
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.26% (3/92) 5.13 9.1e-05 0.003859
GO:0043038 amino acid activation 3.26% (3/92) 5.13 9.1e-05 0.003859
GO:0004812 aminoacyl-tRNA ligase activity 3.26% (3/92) 5.13 9.1e-05 0.003859
GO:0006399 tRNA metabolic process 3.26% (3/92) 4.52 0.000322 0.00781
GO:0140101 catalytic activity, acting on a tRNA 3.26% (3/92) 4.66 0.00024 0.008157
GO:0006520 amino acid metabolic process 4.35% (4/92) 3.67 0.000295 0.008349
GO:0034660 ncRNA metabolic process 3.26% (3/92) 4.18 0.000636 0.013524
GO:0035639 purine ribonucleoside triphosphate binding 10.87% (10/92) 1.71 0.000976 0.018431
GO:0044281 small molecule metabolic process 5.43% (5/92) 2.63 0.001366 0.02323
GO:0006082 organic acid metabolic process 4.35% (4/92) 2.9 0.002133 0.025901
GO:0016874 ligase activity 3.26% (3/92) 3.67 0.001764 0.027258
GO:0019752 carboxylic acid metabolic process 4.35% (4/92) 2.9 0.002113 0.027636
GO:0043436 oxoacid metabolic process 4.35% (4/92) 2.9 0.002113 0.027636
GO:0006418 tRNA aminoacylation for protein translation 2.17% (2/92) 4.75 0.002575 0.029186
GO:0048285 organelle fission 1.09% (1/92) 7.92 0.004137 0.030574
GO:0016559 peroxisome fission 1.09% (1/92) 7.92 0.004137 0.030574
GO:0004665 prephenate dehydrogenase (NADP+) activity 1.09% (1/92) 7.92 0.004137 0.030574
GO:0006571 tyrosine biosynthetic process 1.09% (1/92) 7.92 0.004137 0.030574
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 1.09% (1/92) 7.92 0.004137 0.030574
GO:0008977 prephenate dehydrogenase (NAD+) activity 1.09% (1/92) 7.92 0.004137 0.030574
GO:0017076 purine nucleotide binding 10.87% (10/92) 1.35 0.005794 0.030781
GO:0005524 ATP binding 8.7% (8/92) 1.57 0.00563 0.030874
GO:0140098 catalytic activity, acting on RNA 3.26% (3/92) 3.07 0.005591 0.031682
GO:0043167 ion binding 16.3% (15/92) 1.13 0.00323 0.032296
GO:0031072 heat shock protein binding 1.09% (1/92) 7.5 0.005512 0.032309
GO:0010277 chlorophyllide a oxygenase [overall] activity 1.09% (1/92) 7.5 0.005512 0.032309
GO:0005779 obsolete integral component of peroxisomal membrane 1.09% (1/92) 7.5 0.005512 0.032309
GO:0032555 purine ribonucleotide binding 10.87% (10/92) 1.4 0.004653 0.032956
GO:0008270 zinc ion binding 5.43% (5/92) 2.35 0.003146 0.03343
GO:0032553 ribonucleotide binding 10.87% (10/92) 1.38 0.005053 0.03436
GO:0097367 carbohydrate derivative binding 10.87% (10/92) 1.37 0.005308 0.034709
GO:1901360 organic cyclic compound metabolic process 5.43% (5/92) 2.07 0.006921 0.035654
GO:0042626 ATPase-coupled transmembrane transporter activity 2.17% (2/92) 3.96 0.007435 0.037174
GO:0000166 nucleotide binding 10.87% (10/92) 1.27 0.008389 0.037528
GO:1901265 nucleoside phosphate binding 10.87% (10/92) 1.27 0.008389 0.037528
GO:0006570 tyrosine metabolic process 1.09% (1/92) 6.92 0.008256 0.038987
GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) 1.09% (1/92) 6.92 0.008256 0.038987
GO:0043168 anion binding 10.87% (10/92) 1.25 0.0092 0.040101
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 1.09% (1/92) 6.69 0.009626 0.040908
GO:0005488 binding 23.91% (22/92) 0.73 0.010372 0.043004
GO:0036094 small molecule binding 10.87% (10/92) 1.21 0.011374 0.046037
GO:0051537 2 iron, 2 sulfur cluster binding 1.09% (1/92) 6.33 0.012359 0.046689
GO:0015399 primary active transmembrane transporter activity 2.17% (2/92) 3.61 0.011922 0.047135
GO:0140640 catalytic activity, acting on a nucleic acid 3.26% (3/92) 2.66 0.012212 0.047181
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_66 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_139 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_143 0.032 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_181 0.032 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_7 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_60 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_315 0.041 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_371 0.031 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_45 0.023 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_68 0.022 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_126 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_4 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_24 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_44 0.03 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_47 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_90 0.024 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_91 0.024 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_37 0.018 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.022 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_60 0.018 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_89 0.027 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_124 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_132 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_5 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_76 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_197 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_210 0.026 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_236 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_254 0.022 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_51 0.034 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_271 0.026 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_322 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_331 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_65 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_69 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_119 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_140 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_148 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_53 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_92 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_101 0.037 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_113 0.027 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_9 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_32 0.028 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_62 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_211 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_258 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_71 0.035 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_3 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_12 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_23 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_56 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_60 0.038 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_145 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_149 0.026 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.037 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_106 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_130 0.032 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_144 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_48 0.034 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_68 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_163 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_168 0.043 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_178 0.017 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_6 0.022 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_17 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_21 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_40 0.024 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_151 0.017 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_169 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_185 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_190 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_195 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.03 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_53 0.021 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_57 0.035 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_56 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_125 0.015 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_135 0.043 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_165 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_14 0.026 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_48 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_150 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_165 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_117 0.026 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_124 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_34 0.026 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_64 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_126 0.023 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_127 0.015 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_158 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_166 0.021 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_4 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_50 0.032 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_66 0.023 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_7 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_24 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_30 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_163 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_170 0.033 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_6 0.033 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_127 0.041 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_136 0.018 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_152 0.025 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_88 0.037 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_128 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_145 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_173 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_116 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_37 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.04 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_274 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_279 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_4 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_30 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_45 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_54 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_108 0.023 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_109 0.027 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_116 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_126 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_138 0.019 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_101 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_11 0.029 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_32 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_37 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_146 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_222 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_255 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_258 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_260 0.023 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_115 0.028 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_32 0.022 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_75 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_81 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_121 0.018 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.038 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_153 0.056 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_37 0.021 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_67 0.017 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_86 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_90 0.044 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_13 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_38 0.026 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_41 0.037 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_63 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_187 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_32 0.03 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_178 0.022 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_179 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_26 0.027 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_44 0.023 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_51 0.032 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_63 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_91 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_11 0.039 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.029 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_124 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_11 0.05 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_60 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_63 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_134 0.043 OrthoFinder output from all 47 species Compare
Sequences (92) (download table)

InterPro Domains

GO Terms

Family Terms