ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0005488 | binding | 38.95% (74/190) | 1.55 | 0.0 | 0.0 |
GO:0003674 | molecular_function | 49.47% (94/190) | 1.13 | 0.0 | 0.0 |
GO:0097159 | organic cyclic compound binding | 26.84% (51/190) | 1.8 | 0.0 | 0.0 |
GO:1901363 | heterocyclic compound binding | 26.84% (51/190) | 1.8 | 0.0 | 0.0 |
GO:0003676 | nucleic acid binding | 16.32% (31/190) | 2.33 | 0.0 | 0.0 |
GO:0003723 | RNA binding | 10.0% (19/190) | 2.97 | 0.0 | 0.0 |
GO:0032991 | protein-containing complex | 7.37% (14/190) | 2.69 | 0.0 | 3e-06 |
GO:0006139 | nucleobase-containing compound metabolic process | 6.84% (13/190) | 2.43 | 1e-06 | 4.7e-05 |
GO:0008150 | biological_process | 24.74% (47/190) | 1.03 | 1e-06 | 5.1e-05 |
GO:0005515 | protein binding | 12.11% (23/190) | 1.67 | 1e-06 | 5.4e-05 |
GO:0046483 | heterocycle metabolic process | 6.84% (13/190) | 2.3 | 3e-06 | 0.000115 |
GO:0006725 | cellular aromatic compound metabolic process | 6.84% (13/190) | 2.27 | 4e-06 | 0.000129 |
GO:1901360 | organic cyclic compound metabolic process | 6.84% (13/190) | 2.25 | 4e-06 | 0.000131 |
GO:0005852 | eukaryotic translation initiation factor 3 complex | 1.58% (3/190) | 6.5 | 4e-06 | 0.000133 |
GO:0008135 | translation factor activity, RNA binding | 3.16% (6/190) | 3.78 | 6e-06 | 0.000135 |
GO:0090079 | translation regulator activity, nucleic acid binding | 3.16% (6/190) | 3.78 | 6e-06 | 0.000135 |
GO:0045182 | translation regulator activity | 3.16% (6/190) | 3.78 | 6e-06 | 0.000135 |
GO:0009987 | cellular process | 18.42% (35/190) | 1.13 | 8e-06 | 0.000194 |
GO:0017076 | purine nucleotide binding | 10.53% (20/190) | 1.48 | 4e-05 | 0.000857 |
GO:0016070 | RNA metabolic process | 4.21% (8/190) | 2.63 | 5.2e-05 | 0.001069 |
GO:0035639 | purine ribonucleoside triphosphate binding | 10.0% (19/190) | 1.49 | 5.5e-05 | 0.001071 |
GO:0032553 | ribonucleotide binding | 10.0% (19/190) | 1.46 | 7.1e-05 | 0.001116 |
GO:1901265 | nucleoside phosphate binding | 10.53% (20/190) | 1.42 | 6.9e-05 | 0.001136 |
GO:0000166 | nucleotide binding | 10.53% (20/190) | 1.42 | 6.9e-05 | 0.001136 |
GO:0032555 | purine ribonucleotide binding | 10.0% (19/190) | 1.47 | 6.4e-05 | 0.001192 |
GO:0090304 | nucleic acid metabolic process | 4.74% (9/190) | 2.38 | 6.8e-05 | 0.001209 |
GO:0097367 | carbohydrate derivative binding | 10.0% (19/190) | 1.44 | 8.4e-05 | 0.001279 |
GO:0036094 | small molecule binding | 10.53% (20/190) | 1.36 | 0.000116 | 0.001703 |
GO:0034641 | cellular nitrogen compound metabolic process | 7.89% (15/190) | 1.58 | 0.000174 | 0.002385 |
GO:0034654 | nucleobase-containing compound biosynthetic process | 3.16% (6/190) | 2.9 | 0.00017 | 0.002405 |
GO:0043168 | anion binding | 10.0% (19/190) | 1.35 | 0.000195 | 0.00259 |
GO:0005575 | cellular_component | 12.11% (23/190) | 1.19 | 0.000204 | 0.002619 |
GO:0008152 | metabolic process | 15.26% (29/190) | 0.98 | 0.000344 | 0.00429 |
GO:0003746 | translation elongation factor activity | 1.58% (3/190) | 4.4 | 0.000398 | 0.004816 |
GO:0030554 | adenyl nucleotide binding | 7.89% (15/190) | 1.45 | 0.000464 | 0.005444 |
GO:0018130 | heterocycle biosynthetic process | 3.16% (6/190) | 2.59 | 0.00053 | 0.006052 |
GO:0051276 | chromosome organization | 1.58% (3/190) | 4.24 | 0.000552 | 0.006128 |
GO:0019438 | aromatic compound biosynthetic process | 3.16% (6/190) | 2.57 | 0.000568 | 0.006143 |
GO:0043167 | ion binding | 12.63% (24/190) | 1.05 | 0.000588 | 0.006201 |
GO:0005524 | ATP binding | 7.37% (14/190) | 1.46 | 0.000668 | 0.006867 |
GO:0032559 | adenyl ribonucleotide binding | 7.37% (14/190) | 1.43 | 0.000775 | 0.007773 |
GO:0071704 | organic substance metabolic process | 13.68% (26/190) | 0.97 | 0.000814 | 0.007966 |
GO:1901362 | organic cyclic compound biosynthetic process | 3.16% (6/190) | 2.46 | 0.000855 | 0.00817 |
GO:0044238 | primary metabolic process | 13.16% (25/190) | 0.98 | 0.000887 | 0.008288 |
GO:0006807 | nitrogen compound metabolic process | 11.58% (22/190) | 1.05 | 0.000985 | 0.008997 |
GO:0044237 | cellular metabolic process | 11.58% (22/190) | 1.03 | 0.001168 | 0.010438 |
GO:0043170 | macromolecule metabolic process | 10.53% (20/190) | 1.07 | 0.001448 | 0.012666 |
GO:0000786 | nucleosome | 1.05% (2/190) | 4.92 | 0.001987 | 0.017015 |
GO:0032993 | protein-DNA complex | 1.05% (2/190) | 4.85 | 0.002192 | 0.018382 |
GO:0003743 | translation initiation factor activity | 1.58% (3/190) | 3.49 | 0.002512 | 0.020651 |
GO:0016043 | cellular component organization | 2.63% (5/190) | 2.33 | 0.00335 | 0.022947 |
GO:0016055 | Wnt signaling pathway | 0.53% (1/190) | 8.24 | 0.003307 | 0.023035 |
GO:0007166 | cell surface receptor signaling pathway | 0.53% (1/190) | 8.24 | 0.003307 | 0.023035 |
GO:0070273 | phosphatidylinositol-4-phosphate binding | 0.53% (1/190) | 8.24 | 0.003307 | 0.023035 |
GO:1905114 | cell surface receptor signaling pathway involved in cell-cell signaling | 0.53% (1/190) | 8.24 | 0.003307 | 0.023035 |
GO:0044815 | DNA packaging complex | 1.05% (2/190) | 4.66 | 0.002862 | 0.023061 |
GO:0005737 | cytoplasm | 1.58% (3/190) | 3.4 | 0.002977 | 0.023532 |
GO:0006414 | translational elongation | 1.05% (2/190) | 4.49 | 0.003616 | 0.024361 |
GO:0006996 | organelle organization | 1.58% (3/190) | 3.35 | 0.00328 | 0.02451 |
GO:1901293 | nucleoside phosphate biosynthetic process | 1.58% (3/190) | 3.35 | 0.00328 | 0.02451 |
GO:0009165 | nucleotide biosynthetic process | 1.58% (3/190) | 3.35 | 0.00328 | 0.02451 |
GO:0071103 | DNA conformation change | 1.05% (2/190) | 4.43 | 0.003885 | 0.025756 |
GO:0055086 | nucleobase-containing small molecule metabolic process | 2.11% (4/190) | 2.61 | 0.004371 | 0.028073 |
GO:0071840 | cellular component organization or biogenesis | 2.63% (5/190) | 2.24 | 0.004341 | 0.028317 |
GO:0140513 | nuclear protein-containing complex | 1.58% (3/190) | 3.15 | 0.004806 | 0.03039 |
GO:0016887 | ATP hydrolysis activity | 2.11% (4/190) | 2.53 | 0.005286 | 0.032916 |
GO:0005839 | proteasome core complex | 1.05% (2/190) | 4.11 | 0.006024 | 0.036951 |
GO:0050794 | regulation of cellular process | 4.21% (8/190) | 1.56 | 0.00617 | 0.03729 |
GO:0005849 | mRNA cleavage factor complex | 0.53% (1/190) | 7.24 | 0.006603 | 0.03769 |
GO:0006378 | mRNA polyadenylation | 0.53% (1/190) | 7.24 | 0.006603 | 0.03769 |
GO:0018279 | protein N-linked glycosylation via asparagine | 0.53% (1/190) | 7.24 | 0.006603 | 0.03769 |
GO:0006418 | tRNA aminoacylation for protein translation | 1.05% (2/190) | 4.03 | 0.006713 | 0.037797 |
GO:0035091 | phosphatidylinositol binding | 1.05% (2/190) | 4.07 | 0.006364 | 0.037908 |
GO:0034660 | ncRNA metabolic process | 1.58% (3/190) | 2.97 | 0.00686 | 0.038101 |
GO:0051082 | unfolded protein binding | 1.58% (3/190) | 2.92 | 0.007528 | 0.040712 |
GO:0050789 | regulation of biological process | 4.21% (8/190) | 1.52 | 0.007435 | 0.040744 |
GO:0034728 | nucleosome organization | 1.05% (2/190) | 3.92 | 0.007812 | 0.041161 |
GO:0006334 | nucleosome assembly | 1.05% (2/190) | 3.92 | 0.007812 | 0.041161 |
GO:0065007 | biological regulation | 4.21% (8/190) | 1.49 | 0.008381 | 0.042008 |
GO:0071824 | protein-DNA complex subunit organization | 1.05% (2/190) | 3.88 | 0.008194 | 0.042099 |
GO:0065004 | protein-DNA complex assembly | 1.05% (2/190) | 3.88 | 0.008194 | 0.042099 |
GO:0017111 | ribonucleoside triphosphate phosphatase activity | 3.16% (6/190) | 1.79 | 0.008341 | 0.042322 |
GO:0044281 | small molecule metabolic process | 3.16% (6/190) | 1.78 | 0.008563 | 0.042404 |
GO:0016875 | ligase activity, forming carbon-oxygen bonds | 1.05% (2/190) | 3.81 | 0.008985 | 0.04294 |
GO:0004812 | aminoacyl-tRNA ligase activity | 1.05% (2/190) | 3.81 | 0.008985 | 0.04294 |
GO:0090407 | organophosphate biosynthetic process | 1.58% (3/190) | 2.84 | 0.008788 | 0.042998 |
GO:0043038 | amino acid activation | 1.05% (2/190) | 3.78 | 0.009392 | 0.043374 |
GO:0006397 | mRNA processing | 1.05% (2/190) | 3.78 | 0.009392 | 0.043374 |
GO:0043039 | tRNA aminoacylation | 1.05% (2/190) | 3.78 | 0.009392 | 0.043374 |
GO:0000313 | organellar ribosome | 0.53% (1/190) | 6.66 | 0.009888 | 0.044171 |
GO:0005761 | mitochondrial ribosome | 0.53% (1/190) | 6.66 | 0.009888 | 0.044171 |
GO:0006338 | chromatin remodeling | 1.05% (2/190) | 3.75 | 0.009808 | 0.04479 |
GO:0016462 | pyrophosphatase activity | 3.16% (6/190) | 1.7 | 0.011208 | 0.049534 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Actinostachys digitata | HCCA | Cluster_172 | 0.016 | OrthoFinder output from all 47 species | Compare |
Actinostachys digitata | HCCA | Cluster_224 | 0.017 | OrthoFinder output from all 47 species | Compare |
Actinostachys digitata | HCCA | Cluster_226 | 0.024 | OrthoFinder output from all 47 species | Compare |
Actinostachys digitata | HCCA | Cluster_316 | 0.016 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_71 | 0.017 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_80 | 0.017 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_96 | 0.016 | OrthoFinder output from all 47 species | Compare |
Alsophila latebrosa | HCCA | Cluster_20 | 0.021 | OrthoFinder output from all 47 species | Compare |
Alsophila latebrosa | HCCA | Cluster_113 | 0.023 | OrthoFinder output from all 47 species | Compare |
Alsophila latebrosa | HCCA | Cluster_211 | 0.015 | OrthoFinder output from all 47 species | Compare |
Amblovenatum opulentum | HCCA | Cluster_6 | 0.032 | OrthoFinder output from all 47 species | Compare |
Amblovenatum opulentum | HCCA | Cluster_120 | 0.017 | OrthoFinder output from all 47 species | Compare |
Amblovenatum opulentum | HCCA | Cluster_314 | 0.017 | OrthoFinder output from all 47 species | Compare |
Cibotium barometz | HCCA | Cluster_111 | 0.017 | OrthoFinder output from all 47 species | Compare |
Cibotium barometz | HCCA | Cluster_199 | 0.022 | OrthoFinder output from all 47 species | Compare |
Cibotium barometz | HCCA | Cluster_284 | 0.02 | OrthoFinder output from all 47 species | Compare |
Cyanophora paradoxa | HCCA | Cluster_13 | 0.022 | OrthoFinder output from all 47 species | Compare |
Cyanophora paradoxa | HCCA | Cluster_85 | 0.015 | OrthoFinder output from all 47 species | Compare |
Chlamydomonas reinhardtii | HCCA | Cluster_12 | 0.022 | OrthoFinder output from all 47 species | Compare |
Chlamydomonas reinhardtii | HCCA | Cluster_81 | 0.034 | OrthoFinder output from all 47 species | Compare |
Chlamydomonas reinhardtii | HCCA | Cluster_84 | 0.023 | OrthoFinder output from all 47 species | Compare |
Ceratopteris richardii | HCCA | Cluster_10 | 0.031 | OrthoFinder output from all 47 species | Compare |
Ceratopteris richardii | HCCA | Cluster_121 | 0.016 | OrthoFinder output from all 47 species | Compare |
Ceratopteris richardii | HCCA | Cluster_142 | 0.023 | OrthoFinder output from all 47 species | Compare |
Dicranopteris curranii | HCCA | Cluster_38 | 0.016 | OrthoFinder output from all 47 species | Compare |
Davallia denticulata | HCCA | Cluster_23 | 0.017 | OrthoFinder output from all 47 species | Compare |
Equisetum hyemale | HCCA | Cluster_32 | 0.017 | OrthoFinder output from all 47 species | Compare |
Ginkgo biloba | HCCA | Cluster_11 | 0.016 | OrthoFinder output from all 47 species | Compare |
Lindsaea ensifolia | HCCA | Cluster_154 | 0.016 | OrthoFinder output from all 47 species | Compare |
Lindsaea ensifolia | HCCA | Cluster_155 | 0.017 | OrthoFinder output from all 47 species | Compare |
Lygodium flexuosum | HCCA | Cluster_47 | 0.017 | OrthoFinder output from all 47 species | Compare |
Lygodium flexuosum | HCCA | Cluster_94 | 0.02 | OrthoFinder output from all 47 species | Compare |
Microlepia speluncae | HCCA | Cluster_33 | 0.017 | OrthoFinder output from all 47 species | Compare |
Microlepia speluncae | HCCA | Cluster_71 | 0.015 | OrthoFinder output from all 47 species | Compare |
Marchantia polymorpha | HCCA | Cluster_26 | 0.029 | OrthoFinder output from all 47 species | Compare |
Ophioglossum reticulatum | HCCA | Cluster_137 | 0.024 | OrthoFinder output from all 47 species | Compare |
Picea abies | HCCA | Cluster_241 | 0.024 | OrthoFinder output from all 47 species | Compare |
Pleocnemia irregularis | HCCA | Cluster_51 | 0.016 | OrthoFinder output from all 47 species | Compare |
Pleocnemia irregularis | HCCA | Cluster_96 | 0.02 | OrthoFinder output from all 47 species | Compare |
Pleocnemia irregularis | HCCA | Cluster_127 | 0.016 | OrthoFinder output from all 47 species | Compare |
Pleocnemia irregularis | HCCA | Cluster_157 | 0.018 | OrthoFinder output from all 47 species | Compare |
Pleocnemia irregularis | HCCA | Cluster_223 | 0.017 | OrthoFinder output from all 47 species | Compare |
Pleocnemia irregularis | HCCA | Cluster_225 | 0.017 | OrthoFinder output from all 47 species | Compare |
Psilotum nudum | HCCA | Cluster_29 | 0.017 | OrthoFinder output from all 47 species | Compare |
Pyrrosia piloselloides | HCCA | Cluster_177 | 0.018 | OrthoFinder output from all 47 species | Compare |
Pyrrosia piloselloides | HCCA | Cluster_193 | 0.015 | OrthoFinder output from all 47 species | Compare |
Pyrrosia piloselloides | HCCA | Cluster_272 | 0.016 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_10 | 0.02 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_28 | 0.02 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_62 | 0.017 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_74 | 0.024 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_85 | 0.033 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_91 | 0.021 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_148 | 0.019 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_179 | 0.017 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_19 | 0.019 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_21 | 0.016 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_22 | 0.02 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_130 | 0.022 | OrthoFinder output from all 47 species | Compare |
Selaginella moellendorffii | HCCA | Cluster_87 | 0.019 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_32 | 0.016 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_47 | 0.016 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_57 | 0.02 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_100 | 0.016 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_138 | 0.017 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_185 | 0.015 | OrthoFinder output from all 47 species | Compare |
Tectaria incisa | HCCA | Cluster_141 | 0.023 | OrthoFinder output from all 47 species | Compare |
Vitis vinifera | HCCA | Cluster_85 | 0.018 | OrthoFinder output from all 47 species | Compare |
Vitis vinifera | HCCA | Cluster_95 | 0.016 | OrthoFinder output from all 47 species | Compare |
Zea mays | HCCA | Cluster_71 | 0.017 | OrthoFinder output from all 47 species | Compare |
Arabidopsis thaliana | HCCA | Cluster_85 | 0.018 | OrthoFinder output from all 47 species | Compare |
Arabidopsis thaliana | HCCA | Cluster_120 | 0.016 | OrthoFinder output from all 47 species | Compare |
Arabidopsis thaliana | HCCA | Cluster_137 | 0.019 | OrthoFinder output from all 47 species | Compare |