Coexpression cluster: Cluster_137 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 38.95% (74/190) 1.55 0.0 0.0
GO:0003674 molecular_function 49.47% (94/190) 1.13 0.0 0.0
GO:0097159 organic cyclic compound binding 26.84% (51/190) 1.8 0.0 0.0
GO:1901363 heterocyclic compound binding 26.84% (51/190) 1.8 0.0 0.0
GO:0003676 nucleic acid binding 16.32% (31/190) 2.33 0.0 0.0
GO:0003723 RNA binding 10.0% (19/190) 2.97 0.0 0.0
GO:0032991 protein-containing complex 7.37% (14/190) 2.69 0.0 3e-06
GO:0006139 nucleobase-containing compound metabolic process 6.84% (13/190) 2.43 1e-06 4.7e-05
GO:0008150 biological_process 24.74% (47/190) 1.03 1e-06 5.1e-05
GO:0005515 protein binding 12.11% (23/190) 1.67 1e-06 5.4e-05
GO:0046483 heterocycle metabolic process 6.84% (13/190) 2.3 3e-06 0.000115
GO:0006725 cellular aromatic compound metabolic process 6.84% (13/190) 2.27 4e-06 0.000129
GO:1901360 organic cyclic compound metabolic process 6.84% (13/190) 2.25 4e-06 0.000131
GO:0005852 eukaryotic translation initiation factor 3 complex 1.58% (3/190) 6.5 4e-06 0.000133
GO:0008135 translation factor activity, RNA binding 3.16% (6/190) 3.78 6e-06 0.000135
GO:0090079 translation regulator activity, nucleic acid binding 3.16% (6/190) 3.78 6e-06 0.000135
GO:0045182 translation regulator activity 3.16% (6/190) 3.78 6e-06 0.000135
GO:0009987 cellular process 18.42% (35/190) 1.13 8e-06 0.000194
GO:0017076 purine nucleotide binding 10.53% (20/190) 1.48 4e-05 0.000857
GO:0016070 RNA metabolic process 4.21% (8/190) 2.63 5.2e-05 0.001069
GO:0035639 purine ribonucleoside triphosphate binding 10.0% (19/190) 1.49 5.5e-05 0.001071
GO:0032553 ribonucleotide binding 10.0% (19/190) 1.46 7.1e-05 0.001116
GO:1901265 nucleoside phosphate binding 10.53% (20/190) 1.42 6.9e-05 0.001136
GO:0000166 nucleotide binding 10.53% (20/190) 1.42 6.9e-05 0.001136
GO:0032555 purine ribonucleotide binding 10.0% (19/190) 1.47 6.4e-05 0.001192
GO:0090304 nucleic acid metabolic process 4.74% (9/190) 2.38 6.8e-05 0.001209
GO:0097367 carbohydrate derivative binding 10.0% (19/190) 1.44 8.4e-05 0.001279
GO:0036094 small molecule binding 10.53% (20/190) 1.36 0.000116 0.001703
GO:0034641 cellular nitrogen compound metabolic process 7.89% (15/190) 1.58 0.000174 0.002385
GO:0034654 nucleobase-containing compound biosynthetic process 3.16% (6/190) 2.9 0.00017 0.002405
GO:0043168 anion binding 10.0% (19/190) 1.35 0.000195 0.00259
GO:0005575 cellular_component 12.11% (23/190) 1.19 0.000204 0.002619
GO:0008152 metabolic process 15.26% (29/190) 0.98 0.000344 0.00429
GO:0003746 translation elongation factor activity 1.58% (3/190) 4.4 0.000398 0.004816
GO:0030554 adenyl nucleotide binding 7.89% (15/190) 1.45 0.000464 0.005444
GO:0018130 heterocycle biosynthetic process 3.16% (6/190) 2.59 0.00053 0.006052
GO:0051276 chromosome organization 1.58% (3/190) 4.24 0.000552 0.006128
GO:0019438 aromatic compound biosynthetic process 3.16% (6/190) 2.57 0.000568 0.006143
GO:0043167 ion binding 12.63% (24/190) 1.05 0.000588 0.006201
GO:0005524 ATP binding 7.37% (14/190) 1.46 0.000668 0.006867
GO:0032559 adenyl ribonucleotide binding 7.37% (14/190) 1.43 0.000775 0.007773
GO:0071704 organic substance metabolic process 13.68% (26/190) 0.97 0.000814 0.007966
GO:1901362 organic cyclic compound biosynthetic process 3.16% (6/190) 2.46 0.000855 0.00817
GO:0044238 primary metabolic process 13.16% (25/190) 0.98 0.000887 0.008288
GO:0006807 nitrogen compound metabolic process 11.58% (22/190) 1.05 0.000985 0.008997
GO:0044237 cellular metabolic process 11.58% (22/190) 1.03 0.001168 0.010438
GO:0043170 macromolecule metabolic process 10.53% (20/190) 1.07 0.001448 0.012666
GO:0000786 nucleosome 1.05% (2/190) 4.92 0.001987 0.017015
GO:0032993 protein-DNA complex 1.05% (2/190) 4.85 0.002192 0.018382
GO:0003743 translation initiation factor activity 1.58% (3/190) 3.49 0.002512 0.020651
GO:0016043 cellular component organization 2.63% (5/190) 2.33 0.00335 0.022947
GO:0016055 Wnt signaling pathway 0.53% (1/190) 8.24 0.003307 0.023035
GO:0007166 cell surface receptor signaling pathway 0.53% (1/190) 8.24 0.003307 0.023035
GO:0070273 phosphatidylinositol-4-phosphate binding 0.53% (1/190) 8.24 0.003307 0.023035
GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling 0.53% (1/190) 8.24 0.003307 0.023035
GO:0044815 DNA packaging complex 1.05% (2/190) 4.66 0.002862 0.023061
GO:0005737 cytoplasm 1.58% (3/190) 3.4 0.002977 0.023532
GO:0006414 translational elongation 1.05% (2/190) 4.49 0.003616 0.024361
GO:0006996 organelle organization 1.58% (3/190) 3.35 0.00328 0.02451
GO:1901293 nucleoside phosphate biosynthetic process 1.58% (3/190) 3.35 0.00328 0.02451
GO:0009165 nucleotide biosynthetic process 1.58% (3/190) 3.35 0.00328 0.02451
GO:0071103 DNA conformation change 1.05% (2/190) 4.43 0.003885 0.025756
GO:0055086 nucleobase-containing small molecule metabolic process 2.11% (4/190) 2.61 0.004371 0.028073
GO:0071840 cellular component organization or biogenesis 2.63% (5/190) 2.24 0.004341 0.028317
GO:0140513 nuclear protein-containing complex 1.58% (3/190) 3.15 0.004806 0.03039
GO:0016887 ATP hydrolysis activity 2.11% (4/190) 2.53 0.005286 0.032916
GO:0005839 proteasome core complex 1.05% (2/190) 4.11 0.006024 0.036951
GO:0050794 regulation of cellular process 4.21% (8/190) 1.56 0.00617 0.03729
GO:0005849 mRNA cleavage factor complex 0.53% (1/190) 7.24 0.006603 0.03769
GO:0006378 mRNA polyadenylation 0.53% (1/190) 7.24 0.006603 0.03769
GO:0018279 protein N-linked glycosylation via asparagine 0.53% (1/190) 7.24 0.006603 0.03769
GO:0006418 tRNA aminoacylation for protein translation 1.05% (2/190) 4.03 0.006713 0.037797
GO:0035091 phosphatidylinositol binding 1.05% (2/190) 4.07 0.006364 0.037908
GO:0034660 ncRNA metabolic process 1.58% (3/190) 2.97 0.00686 0.038101
GO:0051082 unfolded protein binding 1.58% (3/190) 2.92 0.007528 0.040712
GO:0050789 regulation of biological process 4.21% (8/190) 1.52 0.007435 0.040744
GO:0034728 nucleosome organization 1.05% (2/190) 3.92 0.007812 0.041161
GO:0006334 nucleosome assembly 1.05% (2/190) 3.92 0.007812 0.041161
GO:0065007 biological regulation 4.21% (8/190) 1.49 0.008381 0.042008
GO:0071824 protein-DNA complex subunit organization 1.05% (2/190) 3.88 0.008194 0.042099
GO:0065004 protein-DNA complex assembly 1.05% (2/190) 3.88 0.008194 0.042099
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.16% (6/190) 1.79 0.008341 0.042322
GO:0044281 small molecule metabolic process 3.16% (6/190) 1.78 0.008563 0.042404
GO:0016875 ligase activity, forming carbon-oxygen bonds 1.05% (2/190) 3.81 0.008985 0.04294
GO:0004812 aminoacyl-tRNA ligase activity 1.05% (2/190) 3.81 0.008985 0.04294
GO:0090407 organophosphate biosynthetic process 1.58% (3/190) 2.84 0.008788 0.042998
GO:0043038 amino acid activation 1.05% (2/190) 3.78 0.009392 0.043374
GO:0006397 mRNA processing 1.05% (2/190) 3.78 0.009392 0.043374
GO:0043039 tRNA aminoacylation 1.05% (2/190) 3.78 0.009392 0.043374
GO:0000313 organellar ribosome 0.53% (1/190) 6.66 0.009888 0.044171
GO:0005761 mitochondrial ribosome 0.53% (1/190) 6.66 0.009888 0.044171
GO:0006338 chromatin remodeling 1.05% (2/190) 3.75 0.009808 0.04479
GO:0016462 pyrophosphatase activity 3.16% (6/190) 1.7 0.011208 0.049534
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_172 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_224 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_226 0.024 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_316 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_71 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_80 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_20 0.021 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_113 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_211 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_6 0.032 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_120 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_314 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_111 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_199 0.022 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_284 0.02 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_13 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_85 0.015 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_12 0.022 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.034 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_84 0.023 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_10 0.031 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_142 0.023 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_38 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_23 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_11 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_154 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_155 0.017 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_47 0.017 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_94 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_33 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_71 0.015 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.029 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_137 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_241 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_51 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_96 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_127 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_157 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_223 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_225 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_29 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_177 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_193 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_272 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_10 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_28 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_62 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_74 0.024 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_85 0.033 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_91 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_148 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_179 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_22 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_130 0.022 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_32 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_57 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_100 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_138 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_185 0.015 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_141 0.023 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_85 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_95 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_71 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_85 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_120 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_137 0.019 OrthoFinder output from all 47 species Compare
Sequences (190) (download table)

InterPro Domains

GO Terms

Family Terms