Coexpression cluster: Cluster_117 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009536 plastid 69.57% (64/92) 2.33 0.0 0.0
GO:0009507 chloroplast 68.48% (63/92) 2.34 0.0 0.0
GO:0009668 plastid membrane organization 16.3% (15/92) 4.52 0.0 0.0
GO:0010027 thylakoid membrane organization 16.3% (15/92) 4.52 0.0 0.0
GO:0000023 maltose metabolic process 15.22% (14/92) 4.79 0.0 0.0
GO:0061024 membrane organization 16.3% (15/92) 4.42 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 16.3% (15/92) 4.31 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 16.3% (15/92) 4.31 0.0 0.0
GO:0046490 isopentenyl diphosphate metabolic process 16.3% (15/92) 4.28 0.0 0.0
GO:0009240 isopentenyl diphosphate biosynthetic process 16.3% (15/92) 4.28 0.0 0.0
GO:0019252 starch biosynthetic process 15.22% (14/92) 4.49 0.0 0.0
GO:0005984 disaccharide metabolic process 15.22% (14/92) 4.45 0.0 0.0
GO:0009311 oligosaccharide metabolic process 15.22% (14/92) 4.32 0.0 0.0
GO:0006081 cellular aldehyde metabolic process 17.39% (16/92) 3.88 0.0 0.0
GO:0005982 starch metabolic process 15.22% (14/92) 4.22 0.0 0.0
GO:0009250 glucan biosynthetic process 15.22% (14/92) 3.9 0.0 0.0
GO:0008654 phospholipid biosynthetic process 16.3% (15/92) 3.54 0.0 0.0
GO:0043085 positive regulation of catalytic activity 10.87% (10/92) 4.72 0.0 0.0
GO:0006644 phospholipid metabolic process 16.3% (15/92) 3.47 0.0 0.0
GO:0044093 positive regulation of molecular function 10.87% (10/92) 4.7 0.0 0.0
GO:0006090 pyruvate metabolic process 16.3% (15/92) 3.44 0.0 0.0
GO:0009532 plastid stroma 18.48% (17/92) 3.12 0.0 0.0
GO:0009570 chloroplast stroma 18.48% (17/92) 3.12 0.0 0.0
GO:0006073 cellular glucan metabolic process 15.22% (14/92) 3.5 0.0 0.0
GO:0044042 glucan metabolic process 15.22% (14/92) 3.5 0.0 0.0
GO:0009059 macromolecule biosynthetic process 22.83% (21/92) 2.39 0.0 0.0
GO:0033692 cellular polysaccharide biosynthetic process 15.22% (14/92) 3.15 0.0 0.0
GO:0044255 cellular lipid metabolic process 21.74% (20/92) 2.38 0.0 0.0
GO:0050790 regulation of catalytic activity 10.87% (10/92) 3.93 0.0 0.0
GO:0044249 cellular biosynthetic process 35.87% (33/92) 1.63 0.0 0.0
GO:0009058 biosynthetic process 39.13% (36/92) 1.51 0.0 0.0
GO:0006778 porphyrin-containing compound metabolic process 10.87% (10/92) 3.91 0.0 0.0
GO:0034637 cellular carbohydrate biosynthetic process 15.22% (14/92) 3.04 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 10.87% (10/92) 3.9 0.0 0.0
GO:0008610 lipid biosynthetic process 20.65% (19/92) 2.4 0.0 0.0
GO:0044237 cellular metabolic process 52.17% (48/92) 1.13 0.0 0.0
GO:0016556 mRNA modification 8.7% (8/92) 4.39 0.0 0.0
GO:0000271 polysaccharide biosynthetic process 15.22% (14/92) 2.9 0.0 0.0
GO:0044264 cellular polysaccharide metabolic process 15.22% (14/92) 2.89 0.0 0.0
GO:0009657 plastid organization 11.96% (11/92) 3.45 0.0 0.0
GO:1901576 organic substance biosynthetic process 36.96% (34/92) 1.5 0.0 0.0
GO:0009658 chloroplast organization 10.87% (10/92) 3.68 0.0 0.0
GO:0065009 regulation of molecular function 10.87% (10/92) 3.63 0.0 0.0
GO:0008152 metabolic process 56.52% (52/92) 0.99 0.0 0.0
GO:0090407 organophosphate biosynthetic process 16.3% (15/92) 2.62 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 17.39% (16/92) 2.48 0.0 0.0
GO:0044262 cellular carbohydrate metabolic process 15.22% (14/92) 2.71 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 32.61% (30/92) 1.55 0.0 0.0
GO:0005976 polysaccharide metabolic process 15.22% (14/92) 2.68 0.0 0.0
GO:0019750 chloroplast localization 7.61% (7/92) 4.34 0.0 1e-06
GO:0051644 plastid localization 7.61% (7/92) 4.34 0.0 1e-06
GO:0009902 chloroplast relocation 7.61% (7/92) 4.35 0.0 1e-06
GO:0051667 establishment of plastid localization 7.61% (7/92) 4.35 0.0 1e-06
GO:0042440 pigment metabolic process 10.87% (10/92) 3.35 0.0 1e-06
GO:0046483 heterocycle metabolic process 31.52% (29/92) 1.55 0.0 1e-06
GO:0006629 lipid metabolic process 21.74% (20/92) 2.04 0.0 1e-06
GO:0051656 establishment of organelle localization 7.61% (7/92) 4.31 0.0 1e-06
GO:0016051 carbohydrate biosynthetic process 16.3% (15/92) 2.44 0.0 1e-06
GO:0016070 RNA metabolic process 20.65% (19/92) 2.05 0.0 1e-06
GO:1901135 carbohydrate derivative metabolic process 17.39% (16/92) 2.3 0.0 1e-06
GO:0042793 plastid transcription 6.52% (6/92) 4.67 0.0 1e-06
GO:0071704 organic substance metabolic process 51.09% (47/92) 0.96 0.0 4e-06
GO:0006779 porphyrin-containing compound biosynthetic process 7.61% (7/92) 3.96 0.0 4e-06
GO:1901360 organic cyclic compound metabolic process 32.61% (30/92) 1.39 0.0 4e-06
GO:0033014 tetrapyrrole biosynthetic process 7.61% (7/92) 3.92 0.0 4e-06
GO:0006725 cellular aromatic compound metabolic process 31.52% (29/92) 1.41 0.0 5e-06
GO:0043436 oxoacid metabolic process 22.83% (21/92) 1.77 1e-06 5e-06
GO:0034660 ncRNA metabolic process 11.96% (11/92) 2.79 1e-06 6e-06
GO:0006082 organic acid metabolic process 22.83% (21/92) 1.73 1e-06 8e-06
GO:0016226 iron-sulfur cluster assembly 6.52% (6/92) 4.19 1e-06 9e-06
GO:0031163 metallo-sulfur cluster assembly 6.52% (6/92) 4.19 1e-06 9e-06
GO:0019752 carboxylic acid metabolic process 21.74% (20/92) 1.78 1e-06 9e-06
GO:0019637 organophosphate metabolic process 17.39% (16/92) 2.07 1e-06 1e-05
GO:0006807 nitrogen compound metabolic process 40.22% (37/92) 1.12 1e-06 1e-05
GO:0006364 rRNA processing 8.7% (8/92) 3.37 1e-06 1e-05
GO:0016117 carotenoid biosynthetic process 6.52% (6/92) 4.16 1e-06 1e-05
GO:0016109 tetraterpenoid biosynthetic process 6.52% (6/92) 4.16 1e-06 1e-05
GO:0016072 rRNA metabolic process 8.7% (8/92) 3.34 1e-06 1.1e-05
GO:0016108 tetraterpenoid metabolic process 6.52% (6/92) 4.09 2e-06 1.2e-05
GO:0016116 carotenoid metabolic process 6.52% (6/92) 4.09 2e-06 1.2e-05
GO:0044238 primary metabolic process 45.65% (42/92) 0.98 2e-06 1.4e-05
GO:0006098 pentose-phosphate shunt 7.61% (7/92) 3.58 2e-06 1.7e-05
GO:0051640 organelle localization 7.61% (7/92) 3.58 2e-06 1.7e-05
GO:0006655 phosphatidylglycerol biosynthetic process 5.43% (5/92) 4.58 2e-06 1.7e-05
GO:0046471 phosphatidylglycerol metabolic process 5.43% (5/92) 4.55 2e-06 1.8e-05
GO:0051156 glucose 6-phosphate metabolic process 7.61% (7/92) 3.53 3e-06 2e-05
GO:0006740 NADPH regeneration 7.61% (7/92) 3.52 3e-06 2e-05
GO:0006739 NADP metabolic process 7.61% (7/92) 3.5 3e-06 2.3e-05
GO:0046496 nicotinamide nucleotide metabolic process 7.61% (7/92) 3.46 4e-06 2.7e-05
GO:0019362 pyridine nucleotide metabolic process 7.61% (7/92) 3.43 4e-06 3e-05
GO:0005975 carbohydrate metabolic process 17.39% (16/92) 1.92 4e-06 3.1e-05
GO:0043170 macromolecule metabolic process 35.87% (33/92) 1.13 4e-06 3.1e-05
GO:0006796 phosphate-containing compound metabolic process 19.57% (18/92) 1.76 5e-06 3.3e-05
GO:0072524 pyridine-containing compound metabolic process 7.61% (7/92) 3.38 5e-06 3.6e-05
GO:0006793 phosphorus metabolic process 19.57% (18/92) 1.74 6e-06 3.8e-05
GO:0032787 monocarboxylic acid metabolic process 17.39% (16/92) 1.89 6e-06 3.9e-05
GO:0090304 nucleic acid metabolic process 21.74% (20/92) 1.61 6e-06 3.9e-05
GO:0008299 isoprenoid biosynthetic process 8.7% (8/92) 3.03 7e-06 4.4e-05
GO:0042170 plastid membrane 9.78% (9/92) 2.78 7e-06 4.6e-05
GO:0016043 cellular component organization 23.91% (22/92) 1.49 7e-06 4.8e-05
GO:0043231 intracellular membrane-bounded organelle 81.52% (75/92) 0.44 9e-06 5.5e-05
GO:0071840 cellular component organization or biogenesis 25.0% (23/92) 1.42 9e-06 5.6e-05
GO:0043227 membrane-bounded organelle 81.52% (75/92) 0.44 9e-06 5.6e-05
GO:0006139 nucleobase-containing compound metabolic process 25.0% (23/92) 1.42 1e-05 6.1e-05
GO:0006720 isoprenoid metabolic process 8.7% (8/92) 2.91 1.2e-05 7.4e-05
GO:0009941 chloroplast envelope 10.87% (10/92) 2.49 1.2e-05 7.4e-05
GO:0046148 pigment biosynthetic process 7.61% (7/92) 3.18 1.3e-05 7.9e-05
GO:0009526 plastid envelope 10.87% (10/92) 2.47 1.3e-05 7.9e-05
GO:0009451 RNA modification 8.7% (8/92) 2.89 1.3e-05 8e-05
GO:0009579 thylakoid 8.7% (8/92) 2.88 1.4e-05 8.3e-05
GO:0043229 intracellular organelle 81.52% (75/92) 0.42 1.5e-05 9e-05
GO:0043226 organelle 81.52% (75/92) 0.42 1.5e-05 9e-05
GO:0044281 small molecule metabolic process 25.0% (23/92) 1.37 1.7e-05 9.7e-05
GO:0016071 mRNA metabolic process 8.7% (8/92) 2.81 2e-05 0.000115
GO:0006790 sulfur compound metabolic process 11.96% (11/92) 2.23 2.3e-05 0.000129
GO:0018130 heterocycle biosynthetic process 14.13% (13/92) 1.99 2.3e-05 0.00013
GO:0015994 chlorophyll metabolic process 6.52% (6/92) 3.4 2.4e-05 0.000132
GO:0006351 DNA-templated transcription 6.52% (6/92) 3.36 2.8e-05 0.000153
GO:0097659 nucleic acid-templated transcription 6.52% (6/92) 3.36 2.8e-05 0.000153
GO:0009987 cellular process 56.52% (52/92) 0.67 3e-05 0.000165
GO:0031975 envelope 10.87% (10/92) 2.32 3.2e-05 0.000174
GO:0031967 organelle envelope 10.87% (10/92) 2.32 3.2e-05 0.000174
GO:0044271 cellular nitrogen compound biosynthetic process 15.22% (14/92) 1.79 4.8e-05 0.000256
GO:0034470 ncRNA processing 8.7% (8/92) 2.59 5.8e-05 0.000306
GO:0022607 cellular component assembly 10.87% (10/92) 2.08 0.000131 0.000691
GO:0006091 generation of precursor metabolites and energy 9.78% (9/92) 2.17 0.000176 0.000921
GO:0016120 carotene biosynthetic process 2.17% (2/92) 6.42 0.000227 0.001171
GO:0019438 aromatic compound biosynthetic process 14.13% (13/92) 1.66 0.00023 0.001177
GO:0016114 terpenoid biosynthetic process 6.52% (6/92) 2.81 0.000227 0.001177
GO:0016722 oxidoreductase activity, acting on metal ions 2.17% (2/92) 6.23 0.000303 0.001522
GO:0000293 ferric-chelate reductase activity 2.17% (2/92) 6.23 0.000303 0.001522
GO:0010207 photosystem II assembly 5.43% (5/92) 3.09 0.00031 0.001548
GO:0006996 organelle organization 14.13% (13/92) 1.61 0.000313 0.001551
GO:0046474 glycerophospholipid biosynthetic process 5.43% (5/92) 3.09 0.000318 0.001565
GO:0006721 terpenoid metabolic process 6.52% (6/92) 2.67 0.000372 0.001815
GO:1901362 organic cyclic compound biosynthetic process 15.22% (14/92) 1.5 0.000382 0.001851
GO:0042726 flavin-containing compound metabolic process 2.17% (2/92) 6.06 0.000388 0.001867
GO:0006650 glycerophospholipid metabolic process 5.43% (5/92) 3.01 0.0004 0.001908
GO:0009965 leaf morphogenesis 5.43% (5/92) 3.0 0.00042 0.001989
GO:0045017 glycerolipid biosynthetic process 5.43% (5/92) 2.97 0.000462 0.002174
GO:0032774 RNA biosynthetic process 6.52% (6/92) 2.58 0.000524 0.002449
GO:0019757 glycosinolate metabolic process 5.43% (5/92) 2.9 0.000582 0.00268
GO:0019760 glucosinolate metabolic process 5.43% (5/92) 2.9 0.000582 0.00268
GO:0046486 glycerolipid metabolic process 5.43% (5/92) 2.87 0.000635 0.002908
GO:0009535 chloroplast thylakoid membrane 6.52% (6/92) 2.52 0.000653 0.002969
GO:0055035 plastid thylakoid membrane 6.52% (6/92) 2.51 0.000675 0.003047
GO:0016119 carotene metabolic process 2.17% (2/92) 5.65 0.000707 0.003169
GO:0031090 organelle membrane 11.96% (11/92) 1.65 0.00075 0.003338
GO:0015996 chlorophyll catabolic process 3.26% (3/92) 4.04 0.000825 0.003529
GO:0033015 tetrapyrrole catabolic process 3.26% (3/92) 4.04 0.000825 0.003529
GO:0006787 porphyrin-containing compound catabolic process 3.26% (3/92) 4.04 0.000825 0.003529
GO:0046149 pigment catabolic process 3.26% (3/92) 4.04 0.000825 0.003529
GO:0042651 thylakoid membrane 6.52% (6/92) 2.46 0.000806 0.003541
GO:0034357 photosynthetic membrane 6.52% (6/92) 2.46 0.000806 0.003541
GO:0046246 terpene biosynthetic process 2.17% (2/92) 5.53 0.000834 0.003545
GO:0006396 RNA processing 9.78% (9/92) 1.79 0.001163 0.004915
GO:0035304 regulation of protein dephosphorylation 4.35% (4/92) 3.11 0.001213 0.00509
GO:0035303 regulation of dephosphorylation 4.35% (4/92) 3.1 0.001245 0.005194
GO:0044260 cellular macromolecule metabolic process 18.48% (17/92) 1.16 0.001293 0.005359
GO:0009767 photosynthetic electron transport chain 3.26% (3/92) 3.79 0.001341 0.005453
GO:0019867 outer membrane 6.52% (6/92) 2.32 0.001337 0.005474
GO:0031968 organelle outer membrane 6.52% (6/92) 2.32 0.001337 0.005474
GO:0005983 starch catabolic process 2.17% (2/92) 5.14 0.001441 0.005756
GO:0009251 glucan catabolic process 2.17% (2/92) 5.14 0.001441 0.005756
GO:0044247 cellular polysaccharide catabolic process 2.17% (2/92) 5.14 0.001441 0.005756
GO:0009508 plastid chromosome 2.17% (2/92) 5.06 0.001618 0.006422
GO:0006163 purine nucleotide metabolic process 7.61% (7/92) 2.01 0.001786 0.007046
GO:0042214 terpene metabolic process 2.17% (2/92) 4.98 0.001804 0.007077
GO:1901564 organonitrogen compound metabolic process 26.09% (24/92) 0.87 0.001955 0.007623
GO:0031969 chloroplast membrane 3.26% (3/92) 3.55 0.002181 0.008456
GO:0072521 purine-containing compound metabolic process 7.61% (7/92) 1.95 0.0023 0.008863
GO:0019761 glucosinolate biosynthetic process 4.35% (4/92) 2.83 0.002476 0.009379
GO:0019758 glycosinolate biosynthetic process 4.35% (4/92) 2.83 0.002476 0.009379
GO:0003824 catalytic activity 36.96% (34/92) 0.66 0.002468 0.009455
GO:0006780 uroporphyrinogen III biosynthetic process 1.09% (1/92) 8.23 0.003327 0.011723
GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0047884 FAD diphosphatase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0046502 uroporphyrinogen III metabolic process 1.09% (1/92) 8.23 0.003327 0.011723
GO:0070818 protoporphyrinogen oxidase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0010303 limit dextrinase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0010028 xanthophyll cycle 1.09% (1/92) 8.23 0.003327 0.011723
GO:0004852 uroporphyrinogen-III synthase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0009661 chromoplast organization 1.09% (1/92) 8.23 0.003327 0.011723
GO:0046422 violaxanthin de-epoxidase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0051060 pullulanase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0045436 lycopene beta cyclase activity 1.09% (1/92) 8.23 0.003327 0.011723
GO:0010109 regulation of photosynthesis 2.17% (2/92) 4.53 0.003378 0.011777
GO:0044275 cellular carbohydrate catabolic process 2.17% (2/92) 4.53 0.003378 0.011777
GO:0031977 thylakoid lumen 3.26% (3/92) 3.36 0.003187 0.012003
GO:0022900 electron transport chain 3.26% (3/92) 3.31 0.003503 0.012152
GO:1905392 plant organ morphogenesis 5.43% (5/92) 2.29 0.003654 0.012541
GO:0004222 metalloendopeptidase activity 2.17% (2/92) 4.48 0.00364 0.012559
GO:0015979 photosynthesis 4.35% (4/92) 2.67 0.003698 0.012626
GO:0051174 regulation of phosphorus metabolic process 4.35% (4/92) 2.62 0.004207 0.014218
GO:0019220 regulation of phosphate metabolic process 4.35% (4/92) 2.62 0.004207 0.014218
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 3.26% (3/92) 3.2 0.004314 0.01443
GO:1901566 organonitrogen compound biosynthetic process 11.96% (11/92) 1.33 0.004299 0.014454
GO:0031399 regulation of protein modification process 4.35% (4/92) 2.58 0.004599 0.015305
GO:0065003 protein-containing complex assembly 6.52% (6/92) 1.93 0.004966 0.016445
GO:0009534 chloroplast thylakoid 4.35% (4/92) 2.5 0.005545 0.01818
GO:0031976 plastid thylakoid 4.35% (4/92) 2.5 0.005545 0.01818
GO:0043933 protein-containing complex organization 6.52% (6/92) 1.9 0.005598 0.018264
GO:0043228 non-membrane-bounded organelle 9.78% (9/92) 1.45 0.005659 0.018281
GO:0043232 intracellular non-membrane-bounded organelle 9.78% (9/92) 1.45 0.005659 0.018281
GO:0015995 chlorophyll biosynthetic process 3.26% (3/92) 3.04 0.005948 0.019122
GO:0004856 xylulokinase activity 1.09% (1/92) 7.23 0.006642 0.021045
GO:0042586 peptide deformylase activity 1.09% (1/92) 7.23 0.006642 0.021045
GO:0005363 maltose transmembrane transporter activity 1.09% (1/92) 7.23 0.006642 0.021045
GO:0098588 bounding membrane of organelle 8.7% (8/92) 1.47 0.00853 0.026895
GO:0005694 chromosome 2.17% (2/92) 3.81 0.009047 0.02839
GO:0016787 hydrolase activity 14.13% (13/92) 1.06 0.009209 0.02876
GO:0009706 chloroplast inner membrane 2.17% (2/92) 3.77 0.009457 0.029398
GO:0003935 GTP cyclohydrolase II activity 1.09% (1/92) 6.65 0.009947 0.029797
GO:0080005 photosystem stoichiometry adjustment 1.09% (1/92) 6.65 0.009947 0.029797
GO:0004325 ferrochelatase activity 1.09% (1/92) 6.65 0.009947 0.029797
GO:0004829 threonine-tRNA ligase activity 1.09% (1/92) 6.65 0.009947 0.029797
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 1.09% (1/92) 6.65 0.009947 0.029797
GO:0006435 threonyl-tRNA aminoacylation 1.09% (1/92) 6.65 0.009947 0.029797
GO:0006432 phenylalanyl-tRNA aminoacylation 1.09% (1/92) 6.65 0.009947 0.029797
GO:0004826 phenylalanine-tRNA ligase activity 1.09% (1/92) 6.65 0.009947 0.029797
GO:0006418 tRNA aminoacylation for protein translation 2.17% (2/92) 3.68 0.010738 0.03131
GO:0043039 tRNA aminoacylation 2.17% (2/92) 3.68 0.010738 0.03131
GO:0043038 amino acid activation 2.17% (2/92) 3.68 0.010738 0.03131
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.17% (2/92) 3.68 0.010738 0.03131
GO:0009528 plastid inner membrane 2.17% (2/92) 3.68 0.010738 0.03131
GO:0004812 aminoacyl-tRNA ligase activity 2.17% (2/92) 3.68 0.010738 0.03131
GO:0009295 nucleoid 2.17% (2/92) 3.65 0.01118 0.032457
GO:0090626 plant epidermis morphogenesis 3.26% (3/92) 2.69 0.011487 0.033057
GO:0010103 stomatal complex morphogenesis 3.26% (3/92) 2.69 0.011487 0.033057
GO:0000272 polysaccharide catabolic process 2.17% (2/92) 3.62 0.011631 0.033326
GO:0009117 nucleotide metabolic process 7.61% (7/92) 1.49 0.012427 0.035451
GO:0006753 nucleoside phosphate metabolic process 7.61% (7/92) 1.49 0.01268 0.036017
GO:0004551 dinucleotide phosphatase activity 1.09% (1/92) 6.23 0.013241 0.036975
GO:0015369 calcium:proton antiporter activity 1.09% (1/92) 6.23 0.013241 0.036975
GO:0030026 cellular manganese ion homeostasis 1.09% (1/92) 6.23 0.013241 0.036975
GO:0003933 GTP cyclohydrolase activity 1.09% (1/92) 6.23 0.013241 0.036975
GO:0016829 lyase activity 4.35% (4/92) 2.12 0.013666 0.038001
GO:0008237 metallopeptidase activity 2.17% (2/92) 3.48 0.014002 0.03877
GO:0048481 plant ovule development 3.26% (3/92) 2.58 0.014065 0.038781
GO:0051246 regulation of protein metabolic process 4.35% (4/92) 2.09 0.01468 0.04031
GO:0034654 nucleobase-containing compound biosynthetic process 6.52% (6/92) 1.57 0.015767 0.043114
GO:1902680 positive regulation of RNA biosynthetic process 5.43% (5/92) 1.74 0.017443 0.04711
GO:1903508 positive regulation of nucleic acid-templated transcription 5.43% (5/92) 1.74 0.017443 0.04711
GO:0045893 positive regulation of DNA-templated transcription 5.43% (5/92) 1.74 0.017443 0.04711
GO:0051254 positive regulation of RNA metabolic process 5.43% (5/92) 1.72 0.018048 0.048545
GO:0019748 secondary metabolic process 6.52% (6/92) 1.52 0.018584 0.049784
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_260 0.004 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_274 0.005 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_280 0.005 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_322 0.007 OrthoFinder output from all 39 species Compare
Azolla filiculoides HCCA Cluster_44 0.004 OrthoFinder output from all 39 species Compare
Azolla filiculoides HCCA Cluster_74 0.004 OrthoFinder output from all 39 species Compare
Adiantum latifolium HCCA Cluster_39 0.004 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_76 0.004 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_102 0.004 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_160 0.006 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_178 0.006 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_180 0.006 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_188 0.007 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_212 0.006 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_218 0.006 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_271 0.005 OrthoFinder output from all 39 species Compare
Alsophila spinulosa HCCA Cluster_105 0.004 OrthoFinder output from all 39 species Compare
Alsophila spinulosa HCCA Cluster_119 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_32 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_56 0.005 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_101 0.007 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_102 0.005 OrthoFinder output from all 39 species Compare
Cibotium barometz HCCA Cluster_29 0.004 OrthoFinder output from all 39 species Compare
Ceratopteris richardii HCCA Cluster_116 0.005 OrthoFinder output from all 39 species Compare
Dicranopteris curranii HCCA Cluster_353 0.005 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_1 0.007 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_132 0.007 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.004 OrthoFinder output from all 39 species Compare
Microlepia speluncae HCCA Cluster_17 0.004 OrthoFinder output from all 39 species Compare
Marchantia polymorpha HCCA Cluster_39 0.004 OrthoFinder output from all 39 species Compare
Nephrolepis biserrata HCCA Cluster_165 0.005 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_39 0.005 OrthoFinder output from all 39 species Compare
Picea abies HCCA Cluster_100 0.004 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_48 0.006 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_89 0.012 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_91 0.006 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_105 0.006 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_114 0.006 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_194 0.006 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_251 0.006 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_4 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_52 0.006 OrthoFinder output from all 39 species Compare
Pyrrosia piloselloides HCCA Cluster_37 0.005 OrthoFinder output from all 39 species Compare
Pyrrosia piloselloides HCCA Cluster_60 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_135 0.007 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_26 0.011 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_75 0.005 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_133 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_153 0.008 OrthoFinder output from all 39 species Compare
Selaginella moellendorffii HCCA Cluster_15 0.004 OrthoFinder output from all 39 species Compare
Selaginella moellendorffii HCCA Cluster_65 0.007 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_41 0.005 OrthoFinder output from all 39 species Compare
Tectaria incisa HCCA Cluster_6 0.004 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_9 0.007 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_13 0.013 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_26 0.009 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_44 0.004 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_51 0.014 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_11 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_28 0.009 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_114 0.004 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_44 0.005 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_54 0.006 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_95 0.007 OrthoFinder output from all 39 species Compare
Sequences (92) (download table)

InterPro Domains

GO Terms

Family Terms