Coexpression cluster: Cluster_227 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008299 isoprenoid biosynthetic process 4.88% (2/41) 8.03 2.6e-05 0.001764
GO:0006720 isoprenoid metabolic process 4.88% (2/41) 8.03 2.6e-05 0.001764
GO:1901663 quinone biosynthetic process 2.44% (1/41) 9.62 0.001272 0.012353
GO:0042181 ketone biosynthetic process 2.44% (1/41) 9.62 0.001272 0.012353
GO:0006744 ubiquinone biosynthetic process 2.44% (1/41) 9.62 0.001272 0.012353
GO:0006743 ubiquinone metabolic process 2.44% (1/41) 9.62 0.001272 0.012353
GO:0042586 peptide deformylase activity 2.44% (1/41) 9.62 0.001272 0.012353
GO:1901661 quinone metabolic process 2.44% (1/41) 9.62 0.001272 0.012353
GO:0005737 cytoplasm 4.88% (2/41) 5.21 0.001363 0.012353
GO:0000175 3'-5'-exoribonuclease activity 2.44% (1/41) 10.62 0.000636 0.012356
GO:0004535 poly(A)-specific ribonuclease activity 2.44% (1/41) 10.62 0.000636 0.012356
GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters 2.44% (1/41) 10.62 0.000636 0.012356
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 2.44% (1/41) 10.62 0.000636 0.012356
GO:0004532 exoribonuclease activity 2.44% (1/41) 10.62 0.000636 0.012356
GO:0016491 oxidoreductase activity 12.2% (5/41) 2.48 0.001926 0.016369
GO:0044255 cellular lipid metabolic process 4.88% (2/41) 4.8 0.002388 0.019105
GO:0003743 translation initiation factor activity 4.88% (2/41) 5.3 0.001208 0.020544
GO:0008610 lipid biosynthetic process 4.88% (2/41) 4.7 0.002731 0.020634
GO:0010277 chlorophyllide a oxygenase [overall] activity 2.44% (1/41) 8.3 0.003176 0.021597
GO:0042180 cellular ketone metabolic process 2.44% (1/41) 8.3 0.003176 0.021597
GO:0005852 eukaryotic translation initiation factor 3 complex 2.44% (1/41) 8.03 0.00381 0.024675
GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity 2.44% (1/41) 7.81 0.004444 0.025181
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 2.44% (1/41) 7.81 0.004444 0.025181
GO:0006402 mRNA catabolic process 2.44% (1/41) 7.81 0.004444 0.025181
GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) 2.44% (1/41) 7.3 0.006342 0.026138
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 2.44% (1/41) 7.3 0.006342 0.026138
GO:0051537 2 iron, 2 sulfur cluster binding 2.44% (1/41) 7.3 0.006342 0.026138
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 2.44% (1/41) 7.3 0.006342 0.026138
GO:0090079 translation regulator activity, nucleic acid binding 4.88% (2/41) 4.14 0.005792 0.027162
GO:0045182 translation regulator activity 4.88% (2/41) 4.14 0.005792 0.027162
GO:0008135 translation factor activity, RNA binding 4.88% (2/41) 4.14 0.005792 0.027162
GO:0061630 ubiquitin protein ligase activity 2.44% (1/41) 7.16 0.006974 0.027897
GO:0004527 exonuclease activity 2.44% (1/41) 7.03 0.007606 0.028733
GO:0061659 ubiquitin-like protein ligase activity 2.44% (1/41) 7.03 0.007606 0.028733
GO:0006401 RNA catabolic process 2.44% (1/41) 7.45 0.00571 0.029866
GO:0008408 3'-5' exonuclease activity 2.44% (1/41) 7.45 0.00571 0.029866
GO:0004499 N,N-dimethylaniline monooxygenase activity 2.44% (1/41) 6.71 0.009499 0.034914
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 2.44% (1/41) 6.53 0.010758 0.037516
GO:0004497 monooxygenase activity 4.88% (2/41) 3.68 0.010699 0.038291
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 2.44% (1/41) 6.45 0.011388 0.038718
GO:0006629 lipid metabolic process 4.88% (2/41) 3.6 0.01198 0.039739
GO:0034655 nucleobase-containing compound catabolic process 2.44% (1/41) 6.3 0.012645 0.039994
GO:0019898 extrinsic component of membrane 2.44% (1/41) 6.3 0.012645 0.039994
GO:0010629 negative regulation of gene expression 2.44% (1/41) 6.23 0.013273 0.041027
GO:0003824 catalytic activity 21.95% (9/41) 1.19 0.014447 0.043662
GO:0044270 cellular nitrogen compound catabolic process 2.44% (1/41) 5.86 0.017034 0.04929
GO:0019439 aromatic compound catabolic process 2.44% (1/41) 5.86 0.017034 0.04929
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_10 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_11 0.015 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_36 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_44 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_131 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_170 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_27 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_207 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_299 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_336 0.023 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_68 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_24 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_44 0.015 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_6 0.02 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.015 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_74 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_89 0.027 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_5 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_76 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_146 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_165 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_210 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_149 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_317 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_31 0.022 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_89 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_149 0.023 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_90 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_50 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_220 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_71 0.03 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_33 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_60 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_116 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_93 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_12 0.029 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_59 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_68 0.026 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_6 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_8 0.033 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_61 0.027 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.017 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_133 0.019 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_2 0.015 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_53 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_72 0.025 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_125 0.021 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_12 0.015 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_40 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_116 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_161 0.025 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_22 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_55 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_110 0.02 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_126 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_86 0.015 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_122 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_24 0.022 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_49 0.024 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_111 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_94 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_45 0.024 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_88 0.028 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_306 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_64 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_84 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_113 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_116 0.025 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_121 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_172 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_192 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_225 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.026 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_89 0.024 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_96 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_137 0.036 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_42 0.022 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_165 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_57 0.026 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_83 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_100 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_121 0.027 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_33 0.035 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_22 0.025 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_62 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_456 0.024 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_32 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_169 0.026 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_108 0.036 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_28 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_32 0.025 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_100 0.021 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_129 0.024 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_117 0.016 OrthoFinder output from all 47 species Compare
Sequences (41) (download table)

InterPro Domains

GO Terms

Family Terms