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  5. Gb_15617

Gb_15617


Description : no hits & (original description: none)


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15617
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00232570 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
AT3G19740 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g055524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098877 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g100776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g27974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02714 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g07104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42682.t1 Aspi01Gene42682 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45543.t1 Aspi01Gene45543 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0805.g087571 No alias not classified & original description: CDS=256-3405 0.04 OrthoFinder output from all 47 species
Cba_g05976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G079000.1 Ceric.02G079000 not classified & original description: pacid=50585939... 0.04 OrthoFinder output from all 47 species
Ceric.14G049600.1 Ceric.14G049600 not classified & original description: pacid=50633231... 0.06 OrthoFinder output from all 47 species
Ceric.19G001800.1 Ceric.19G001800 not classified & original description: pacid=50575443... 0.03 OrthoFinder output from all 47 species
Ceric.1Z097100.1 Ceric.1Z097100 not classified & original description: pacid=50640984... 0.08 OrthoFinder output from all 47 species
Ceric.21G078500.1 Ceric.21G078500 not classified & original description: pacid=50604341... 0.04 OrthoFinder output from all 47 species
Dcu_g13726 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21489 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g31555 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g43976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012038001 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
GSVIVT01027983001 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51400.1 LOC_Os02g51400 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
LOC_Os11g43970.1 LOC_Os11g43970 ATPase family AAA domain-containing protein FIGL1... 0.04 OrthoFinder output from all 47 species
Lfl_g17632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428622g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_48428g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_896563g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_93384g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.08 OrthoFinder output from all 47 species
Ore_g04513 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g19292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002972 No alias not classified & original description: CDS=1-3879 0.03 OrthoFinder output from all 47 species
Sam_g29682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g110900.4.1 Solyc03g110900 ATPase family AAA domain-containing protein FIGL1... 0.04 OrthoFinder output from all 47 species
Solyc09g074950.3.1 Solyc09g074950 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Spa_g01811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011359_P005 Zm00001e011359 ATPase family AAA domain-containing protein FIGL1... 0.07 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 300 366
No external refs found!