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GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (Biological process)

"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins." [GOC:krc, GOC:ma, PMID:10025395]


There are 1755 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_192 Amborella trichopoda 0.43 % 0.008421 0.028516
Cluster_164 Chlamydomonas reinhardtii 1.46 % 0.000177 0.009247
Cluster_133 Cyanophora paradoxa 0.83 % 9.5e-05 0.021424
Cluster_41 Gingko biloba 1.02 % 0.000135 0.001149
Cluster_175 Marchantia polymorpha 3.64 % 2.4e-05 0.004858
Cluster_204 Oryza sativa 0.57 % 0.012322 0.040677
Cluster_265 Solanum lycopersicum 0.94 % 0.012386 0.047823
Cluster_260 Zea mays 0.74 % 0.00971 0.040681
Cluster_353 Zea mays 0.96 % 0.007486 0.027966
Cluster_241 Picea abies 0.79 % 0.000144 0.001142
Cluster_451 Abrodictyum obscurum 1.92 % 0.002397 0.03487
Cluster_324 Abrodictyum obscurum 1.32 % 0.003503 0.031331
Cluster_92 Adiantum latifolium 0.47 % 0.010624 0.03279
Cluster_321 Adiantum latifolium 1.61 % 0.003128 0.027627
Cluster_541 Alsophila latebrosa 1.89 % 0.002472 0.040933
Cluster_380 Alsophila latebrosa 1.17 % 2.1e-05 0.001143
Cluster_456 Amblovenatum opulentum 0.6 % 0.002322 0.016255
Cluster_301 Angiopteris evecta 0.99 % 0.00606 0.040272
Cluster_222 Davallia denticulata 0.57 % 0.009889 0.036552
Cluster_483 Davallia denticulata 1.79 % 0.00319 0.019797
Cluster_288 Davallia denticulata 1.43 % 0.003986 0.017822
Cluster_338 Lindsaea ensifolia 0.56 % 0.002982 0.020248
Cluster_71 Microlepia speluncae 0.62 % 0.006567 0.035274
Cluster_450 Nephrolepis biserrata 1.45 % 0.001528 0.03028
Cluster_590 Pleocnemia irregularis 0.51 % 0.008826 0.047969
Cluster_490 Tectaria incisa 2.33 % 0.001846 0.038031
Cluster_567 Pyrrosia piloselloides 0.48 % 0.009741 0.044352
Cluster_583 Pyrrosia piloselloides 0.44 % 0.010434 0.044126
Cluster_501 Stenochlaena palustris 1.03 % 0.005056 0.039437
Cluster_320 Stenochlaena palustris 2.27 % 7e-06 0.000862
Cluster_321 Dicranopteris curranii 0.65 % 0.005958 0.019154
Cluster_88 Lygodium flexuosum 0.57 % 0.012658 0.02806
Cluster_144 Lygodium flexuosum 2.13 % 1.5e-05 0.002978
Sequences (1755) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro Domains

Family Terms