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GO:0043565: sequence-specific DNA binding (Molecular function)

"Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding." [GOC:jl]


There are 35947 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_99 Abrodictyum obscurum 3.75 % 0.000573 0.006008
Cluster_139 Abrodictyum obscurum 2.53 % 0.011095 0.0376
Cluster_181 Abrodictyum obscurum 4.35 % 0.00389 0.035789
Cluster_87 Actinostachys digitata 1.58 % 0.007153 0.035766
Cluster_49 Actinostachys digitata 4.42 % 0.0 1e-06
Cluster_306 Actinostachys digitata 5.36 % 0.000215 0.002692
Cluster_243 Actinostachys digitata 3.39 % 2e-06 0.000417
Cluster_227 Actinostachys digitata 2.96 % 2.8e-05 0.000213
Cluster_93 Actinostachys digitata 1.71 % 0.005708 0.028267
Cluster_82 Angiopteris evecta 1.31 % 0.021843 0.043925
Cluster_3 Angiopteris evecta 1.82 % 0.001938 0.008866
Cluster_8 Azolla filiculoides 5.26 % 3e-06 0.000807
Cluster_38 Azolla filiculoides 6.98 % 0.000983 0.010275
Cluster_146 Adiantum latifolium 5.36 % 0.000182 0.015627
Cluster_46 Adiantum latifolium 2.27 % 0.002209 0.020325
Cluster_32 Adiantum latifolium 2.25 % 0.000413 0.004088
Cluster_140 Alsophila latebrosa 1.89 % 0.010481 0.032408
Cluster_45 Alsophila latebrosa 6.12 % 0.000368 0.03792
Cluster_432 Alsophila latebrosa 33.33 % 0.008427 0.02829
Cluster_204 Alsophila latebrosa 4.76 % 0.006309 0.022533
Cluster_53 Alsophila latebrosa 2.94 % 0.000129 0.000866
Cluster_116 Alsophila latebrosa 2.16 % 0.001935 0.00936
Cluster_165 Amblovenatum opulentum 3.12 % 0.007789 0.040812
Cluster_102 Amblovenatum opulentum 3.05 % 4e-06 0.0003
Cluster_6 Alsophila spinulosa 2.34 % 0.003004 0.017289
Cluster_83 Alsophila spinulosa 2.94 % 0.000326 0.004251
Cluster_43 Alsophila spinulosa 3.45 % 0.000724 0.003703
Cluster_49 Amborella trichopoda 3.39 % 0.000633 0.00504
Cluster_241 Cibotium barometz 1.6 % 0.003707 0.025163
Cluster_376 Cibotium barometz 50.0 % 0.003259 0.036935
Cluster_5 Cibotium barometz 5.97 % 5e-06 0.000573
Cluster_57 Chlamydomonas reinhardtii 4.44 % 0.000835 0.003897
Cluster_70 Ceratopteris richardii 2.63 % 0.000821 0.00634
Cluster_16 Ceratopteris richardii 3.36 % 0.000272 0.048876
Cluster_69 Diplazium proliferum (Lam.) Kaulf. 2.76 % 0.000188 0.010083
Cluster_160 Dicranopteris curranii 4.0 % 0.005644 0.012357
Cluster_169 Dicranopteris curranii 4.08 % 0.005426 0.022791
Cluster_215 Dicranopteris curranii 2.65 % 0.002123 0.023711
Cluster_23 Dicranopteris curranii 4.35 % 6e-06 0.000104
Cluster_175 Davallia denticulata 4.76 % 0.000349 0.002808
Cluster_21 Equisetum hyemale 3.9 % 1.5e-05 0.000117
Cluster_137 Ginkgo biloba 3.67 % 5.6e-05 0.000183
Cluster_14 Ginkgo biloba 2.03 % 0.002817 0.02242
Cluster_8 Ginkgo biloba 4.26 % 0.003601 0.014137
Cluster_101 Ginkgo biloba 2.03 % 0.002817 0.020143
Cluster_47 Ginkgo biloba 3.66 % 0.000515 0.008663
Cluster_1 Ginkgo biloba 3.28 % 0.005993 0.015648
Cluster_69 Lindsaea ensifolia 2.3 % 0.017513 0.046376
Cluster_57 Lindsaea ensifolia 2.5 % 0.014949 0.034332
Cluster_79 Microlepia speluncae 1.6 % 0.00326 0.016139
Cluster_10 Microlepia speluncae 2.1 % 0.001524 0.016319
Cluster_47 Microlepia speluncae 2.34 % 0.001109 0.011922
Cluster_31 Marchantia polymorpha 3.96 % 9e-06 0.000288
Cluster_2 Nephrolepis biserrata 4.08 % 0.003977 0.015511
Cluster_490 Oryza sativa 50.0 % 0.009506 0.04753
Cluster_456 Oryza sativa 40.0 % 0.000224 0.000501
Cluster_455 Oryza sativa 100.0 % 2.3e-05 0.00061
Cluster_11 Oryza sativa 5.26 % 9.6e-05 0.001008
Cluster_183 Oryza sativa 4.65 % 0.017942 0.041775
Cluster_73 Oryza sativa 4.49 % 0.00089 0.01673
Cluster_117 Oryza sativa 3.49 % 0.008158 0.030791
Cluster_81 Oryza sativa 3.64 % 0.001947 0.033987
Cluster_115 Picea abies 3.03 % 0.007578 0.031828
Cluster_897 Picea abies 100.0 % 4e-06 0.000134
Cluster_250 Picea abies 2.22 % 0.013722 0.04879
Cluster_159 Picea abies 3.45 % 0.0059 0.02242
Cluster_461 Picea abies 28.57 % 8e-05 0.002161
Cluster_55 Pleocnemia irregularis 2.94 % 0.002127 0.014253
Cluster_72 Pleocnemia irregularis 2.24 % 0.004586 0.043392
Cluster_47 Psilotum nudum 4.68 % 0.0 0.0
Cluster_127 Physcomitrella patens 1.82 % 0.010125 0.03059
Cluster_245 Pyrrosia piloselloides 7.41 % 1e-06 8e-05
Cluster_223 Pyrrosia piloselloides 3.28 % 0.003271 0.011857
Cluster_33 Salvinia cucullata 3.57 % 0.001884 0.035428
Cluster_20 Solanum lycopersicum 3.43 % 0.000549 0.003306
Cluster_55 Solanum lycopersicum 4.29 % 0.000166 0.001387
Cluster_38 Solanum lycopersicum 6.67 % 0.0 0.0
Cluster_21 Stenochlaena palustris 3.17 % 0.010877 0.036091
Cluster_78 Stenochlaena palustris 3.85 % 3e-06 0.000123
Cluster_393 Stenochlaena palustris 100.0 % 6e-06 0.000166
Cluster_123 Tectaria incisa 2.6 % 0.009632 0.040702
Cluster_14 Tectaria incisa 2.94 % 0.001011 0.005934
Cluster_136 Tectaria incisa 4.39 % 3e-06 0.000548
Cluster_14 Vitis vinifera 4.08 % 3.8e-05 0.000486
Cluster_87 Vitis vinifera 3.88 % 0.000958 0.004344
Cluster_102 Vitis vinifera 10.87 % 1e-06 0.000197
Cluster_153 Zea mays 13.75 % 0.0 0.0
Cluster_12 Zea mays 4.44 % 0.000117 0.000879
Cluster_177 Zea mays 8.7 % 0.000128 0.001297
Cluster_103 Zea mays 5.88 % 0.000582 0.007931
Cluster_110 Zea mays 5.56 % 0.00345 0.034725
Cluster_156 Zea mays 7.07 % 1e-06 4.7e-05
Cluster_158 Zea mays 9.62 % 1.1e-05 0.001196
Cluster_50 Zea mays 3.39 % 0.004413 0.02955
Sequences (35947) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !