AT3G18390 (EMB1865)

Aliases : EMB1865

Description : CRS1 / YhbY (CRM) domain-containing protein

Gene families : OG0001162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001162_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G18390

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00265220	ATCFM3A, CFM3A,...	RNA processing.organelle machineries.RNA...	0.12	OrthoFinder output from all 47 species
AMTR_s00028p00245370	ATCFM2, CFM2,...	RNA processing.organelle machineries.RNA...	0.14	OrthoFinder output from all 47 species
AMTR_s00045p00114550	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.05	OrthoFinder output from all 47 species
AMTR_s00079p00107040	EMB1865,...	CRM-domain containing factor CFM3,...	0.06	OrthoFinder output from all 47 species
Adi_g022878	ATCFM3A, CFM3A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01593	ATCFM2, CFM2	plastidial RNA splicing factor *(CFM2) & original...	0.05	OrthoFinder output from all 47 species
Ala_g21267	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25788	ATCFM2, CFM2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g27469	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03895	ATCFM3A, CFM3A	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17963	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g06265	ATCFM2, CFM2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0015.g013833	ATCFM2, CFM2	not classified & original description: CDS=1-3243	0.12	OrthoFinder output from all 47 species
Azfi_s0203.g057681	ATCFM2, CFM2	not classified & original description: CDS=1647-4091	0.02	OrthoFinder output from all 47 species
Cba_g11329	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16678	ATCFM3A, CFM3A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.05G053300.1	ATCFM2, CFM2,...	not classified & original description: pacid=50577844...	0.1	OrthoFinder output from all 47 species
Ceric.23G047600.1	ATCFM2, CFM2,...	not classified & original description: pacid=50611491...	0.08	OrthoFinder output from all 47 species
Ceric.31G056300.1	ATCFM2, CFM2,...	not classified & original description: pacid=50573909...	0.14	OrthoFinder output from all 47 species
Cre14.g630301	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g18891	ATCFM2, CFM2	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g25274	ATCFM2, CFM2	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g25682	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30519	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12628	EMB1865	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21472	ATCFM2, CFM2	plastidial RNA splicing factor *(CFM2) & original...	0.06	OrthoFinder output from all 47 species
GSVIVT01008296001	EMB1865	CRM-domain containing factor CFM3,...	0.16	OrthoFinder output from all 47 species
GSVIVT01015193001	No alias	RNA processing.organelle machineries.RNA...	0.05	OrthoFinder output from all 47 species
GSVIVT01018109001	ATCFM3A, CFM3A	RNA processing.organelle machineries.RNA...	0.08	OrthoFinder output from all 47 species
GSVIVT01031001001	ATCRS1, CRS1	RNA processing.organelle machineries.RNA...	0.11	OrthoFinder output from all 47 species
GSVIVT01032542001	ATCFM2, CFM2	RNA processing.organelle machineries.RNA...	0.09	OrthoFinder output from all 47 species
Gb_18301	ATCFM2, CFM2	CRM-domain containing factor CFM2, chloroplastic...	0.04	OrthoFinder output from all 47 species
Gb_18302	ATCFM2, CFM2	CRM-domain containing factor CFM2, chloroplastic...	0.03	OrthoFinder output from all 47 species
Gb_18303	ATCFM2, CFM2	CRM-domain containing factor CFM2, chloroplastic...	0.12	OrthoFinder output from all 47 species
Gb_37638	ATCFM3A, CFM3A	CFM2-type plastidial RNA splicing factor. CFM3-type...	0.05	OrthoFinder output from all 47 species
Gb_39217	EMB1865	CFM2-type plastidial RNA splicing factor	0.15	OrthoFinder output from all 47 species
LOC_Os04g39060.2	ATCFM2, CFM2,...	CRM-domain containing factor CFM2, chloroplastic...	0.12	OrthoFinder output from all 47 species
LOC_Os05g47850.1	EMB1865, LOC_Os05g47850	CRM-domain containing factor CFM3,...	0.14	OrthoFinder output from all 47 species
LOC_Os09g19850.1	LOC_Os09g19850	CRM-domain containing factor CFM3,...	0.07	OrthoFinder output from all 47 species
LOC_Os11g37990.1	ATCFM3A, CFM3A,...	CFM3-type plastidial RNA splicing factor	0.06	OrthoFinder output from all 47 species
Len_g08834	ATCFM2, CFM2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05744	ATCFM3A, CFM3A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10233916g0010	ATCFM2, CFM2	CRM-domain containing factor CFM2, chloroplastic...	0.02	OrthoFinder output from all 47 species
MA_10432072g0010	ATCFM3A, CFM3A	CFM2-type plastidial RNA splicing factor	0.06	OrthoFinder output from all 47 species
MA_10435740g0010	EMB1865	CFM2-type plastidial RNA splicing factor	0.06	OrthoFinder output from all 47 species
MA_130902g0010	ATCFM2, CFM2	CRM-domain containing factor CFM2, chloroplastic...	0.04	OrthoFinder output from all 47 species
MA_8161870g0010	ATCFM2, CFM2	CRM-domain containing factor CFM2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Mp3g06280.1	ATCFM2, CFM2	CRM-domain containing factor CFM3,...	0.11	OrthoFinder output from all 47 species
Msp_g31203	ATCFM2, CFM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g43371	ATCFM2, CFM2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g10122	ATCFM2, CFM2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g17170	ATCFM2, CFM2	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g25479	ATCFM2, CFM2	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g35546	ATCFM2, CFM2	plastidial RNA splicing factor *(CFM2) & original...	0.06	OrthoFinder output from all 47 species
Pir_g18629	ATCFM2, CFM2	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g06510	EMB1865	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29461	ATCFM2, CFM2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g46980	ATCFM3A, CFM3A	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023856	ATCFM2, CFM2	not classified & original description: CDS=91-3327	0.04	OrthoFinder output from all 47 species
Sam_g28510	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g52089	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Smo120007	No alias	CRM-domain containing factor CFM3,...	0.05	OrthoFinder output from all 47 species
Smo412905	No alias	CRM-domain containing factor CFM3,...	0.05	OrthoFinder output from all 47 species
Solyc03g119450.3.1	EMB1865, Solyc03g119450	CRM-domain containing factor CFM3,...	0.21	OrthoFinder output from all 47 species
Solyc07g039500.4.1	Solyc07g039500	CRM-domain containing factor CFM3,...	0.22	OrthoFinder output from all 47 species
Solyc09g083350.3.1	ATCFM3A, CFM3A,...	CFM3-type plastidial RNA splicing factor	0.1	OrthoFinder output from all 47 species
Spa_g38741	ATCFM2, CFM2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e011272_P001	ATCFM3A, CFM3A,...	CFM3-type plastidial RNA splicing factor	0.03	OrthoFinder output from all 47 species
Zm00001e032339_P002	EMB1865, Zm00001e032339	CRM-domain containing factor CFM3,...	0.15	OrthoFinder output from all 47 species
Zm00001e033939_P001	Zm00001e033939	CRM-domain containing factor CFM3,...	0.06	OrthoFinder output from all 47 species
Zm00001e041033_P001	ATCFM2, CFM2,...	CFM2-type plastidial RNA splicing factor	0.02	OrthoFinder output from all 47 species
Zm00001e041034_P001	ATCFM2, CFM2,...	CFM2-type plastidial RNA splicing factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006655	phosphatidylglycerol biosynthetic process	RCA	Interproscan
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	None	Extended
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IDA	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0009902	chloroplast relocation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	RCA	Interproscan
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019750	chloroplast localization	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045017	glycerolipid biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046471	phosphatidylglycerol metabolic process	None	Extended
BP	GO:0046474	glycerophospholipid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051644	plastid localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051667	establishment of plastid localization	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	HCCA
BP	GO:0000372	Group I intron splicing	IEP	HCCA
BP	GO:0000373	Group II intron splicing	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000376	RNA splicing, via transesterification reactions with guanosine as nucleophile	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003724	RNA helicase activity	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004526	ribonuclease P activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004532	exoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004549	tRNA-specific ribonuclease activity	IEP	HCCA
MF	GO:0004654	polyribonucleotide nucleotidyltransferase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004818	glutamate-tRNA ligase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006424	glutamyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0007005	mitochondrion organization	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009533	chloroplast stromal thylakoid	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009663	plasmodesma organization	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
CC	GO:0010007	magnesium chelatase complex	IEP	HCCA
BP	GO:0010098	suspensor development	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010206	photosystem II repair	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0010322	regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0010323	negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
CC	GO:0010494	cytoplasmic stress granule	IEP	HCCA
BP	GO:0010496	intercellular transport	IEP	HCCA
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0010677	negative regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016119	carotene metabolic process	IEP	HCCA
BP	GO:0016120	carotene biosynthetic process	IEP	HCCA
BP	GO:0016122	xanthophyll metabolic process	IEP	HCCA
BP	GO:0016123	xanthophyll biosynthetic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030091	protein repair	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034330	cell junction organization	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
CC	GO:0035770	ribonucleoprotein granule	IEP	HCCA
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	HCCA
BP	GO:0042214	terpene metabolic process	IEP	HCCA
CC	GO:0042646	plastid nucleoid	IEP	HCCA
BP	GO:0042793	plastid transcription	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0045036	protein targeting to chloroplast	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045216	cell-cell junction organization	IEP	HCCA
BP	GO:0045827	negative regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0046246	terpene biosynthetic process	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
MF	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	IEP	HCCA
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071071	regulation of phospholipid biosynthetic process	IEP	HCCA
BP	GO:0071072	negative regulation of phospholipid biosynthetic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	HCCA
BP	GO:0072598	protein localization to chloroplast	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901259	chloroplast rRNA processing	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	HCCA
BP	GO:1903726	negative regulation of phospholipid metabolic process	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	654	729
IPR001890	RNA-binding_CRM	442	526
IPR001890	RNA-binding_CRM	245	326

External Links

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AT3G18390 (EMB1865)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation