Coexpression cluster: Cluster_98 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0050658 RNA transport 2.78% (2/72) 7.84 3e-05 0.000653
GO:0006405 RNA export from nucleus 2.78% (2/72) 7.84 3e-05 0.000653
GO:0051028 mRNA transport 2.78% (2/72) 7.84 3e-05 0.000653
GO:0051168 nuclear export 2.78% (2/72) 7.84 3e-05 0.000653
GO:0051236 establishment of RNA localization 2.78% (2/72) 7.84 3e-05 0.000653
GO:0006406 mRNA export from nucleus 2.78% (2/72) 7.84 3e-05 0.000653
GO:0050657 nucleic acid transport 2.78% (2/72) 7.84 3e-05 0.000653
GO:0051169 nuclear transport 2.78% (2/72) 6.46 0.000231 0.003531
GO:0015931 nucleobase-containing compound transport 2.78% (2/72) 6.46 0.000231 0.003531
GO:0006913 nucleocytoplasmic transport 2.78% (2/72) 6.46 0.000231 0.003531
GO:1901663 quinone biosynthetic process 1.39% (1/72) 8.16 0.003483 0.024222
GO:0008541 proteasome regulatory particle, lid subcomplex 1.39% (1/72) 8.16 0.003483 0.024222
GO:0042181 ketone biosynthetic process 1.39% (1/72) 8.16 0.003483 0.024222
GO:0006744 ubiquinone biosynthetic process 1.39% (1/72) 8.16 0.003483 0.024222
GO:0006743 ubiquinone metabolic process 1.39% (1/72) 8.16 0.003483 0.024222
GO:0000124 SAGA complex 1.39% (1/72) 8.16 0.003483 0.024222
GO:0016272 prefoldin complex 1.39% (1/72) 8.16 0.003483 0.024222
GO:1901661 quinone metabolic process 1.39% (1/72) 8.16 0.003483 0.024222
GO:0000228 nuclear chromosome 1.39% (1/72) 9.16 0.001743 0.024243
GO:0008135 translation factor activity, RNA binding 2.78% (2/72) 4.67 0.002825 0.030878
GO:0045182 translation regulator activity 2.78% (2/72) 4.67 0.002825 0.030878
GO:0090079 translation regulator activity, nucleic acid binding 2.78% (2/72) 4.67 0.002825 0.030878
GO:0005694 chromosome 1.39% (1/72) 7.16 0.006954 0.034321
GO:1902680 positive regulation of RNA biosynthetic process 1.39% (1/72) 7.16 0.006954 0.034321
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.39% (1/72) 7.16 0.006954 0.034321
GO:1903508 positive regulation of nucleic acid-templated transcription 1.39% (1/72) 7.16 0.006954 0.034321
GO:0042180 cellular ketone metabolic process 1.39% (1/72) 7.16 0.006954 0.034321
GO:0070461 SAGA-type complex 1.39% (1/72) 7.16 0.006954 0.034321
GO:0045893 positive regulation of DNA-templated transcription 1.39% (1/72) 7.16 0.006954 0.034321
GO:0051254 positive regulation of RNA metabolic process 1.39% (1/72) 7.16 0.006954 0.034321
GO:0003713 transcription coactivator activity 1.39% (1/72) 7.58 0.00522 0.034724
GO:0000123 histone acetyltransferase complex 1.39% (1/72) 6.84 0.008685 0.041525
GO:0003676 nucleic acid binding 9.72% (7/72) 1.58 0.008982 0.041645
GO:0048522 positive regulation of cellular process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0009891 positive regulation of biosynthetic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0010604 positive regulation of macromolecule metabolic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0031328 positive regulation of cellular biosynthetic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0051173 positive regulation of nitrogen compound metabolic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0010557 positive regulation of macromolecule biosynthetic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0031325 positive regulation of cellular metabolic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:0009893 positive regulation of metabolic process 1.39% (1/72) 6.36 0.012138 0.042207
GO:1902493 acetyltransferase complex 1.39% (1/72) 6.58 0.010413 0.044255
GO:0006414 translational elongation 1.39% (1/72) 6.58 0.010413 0.044255
GO:0031248 protein acetyltransferase complex 1.39% (1/72) 6.58 0.010413 0.044255
GO:0043248 proteasome assembly 1.39% (1/72) 6.16 0.01386 0.047124
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_367 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_394 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_41 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_266 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_336 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_2 0.018 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_85 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_191 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_23 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_57 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_85 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_50 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_152 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_139 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_184 0.024 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_83 0.015 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_1 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_162 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_174 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_130 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_147 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.029 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_73 0.019 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_77 0.015 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_70 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_176 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_80 0.015 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_202 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_73 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_96 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_180 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_268 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_87 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_42 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_78 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_29 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_74 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_105 0.024 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_8 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_34 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_57 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_210 0.02 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_166 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_181 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_62 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_93 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_170 0.019 OrthoFinder output from all 47 species Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms