Coexpression cluster: Cluster_48 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 19.57% (9/46) 2.46 2.9e-05 0.001619
GO:0016070 RNA metabolic process 13.04% (6/46) 3.46 1.6e-05 0.001794
GO:0006351 DNA-templated transcription 6.52% (3/46) 5.05 0.000101 0.002796
GO:0097659 nucleic acid-templated transcription 6.52% (3/46) 5.05 0.000101 0.002796
GO:0090304 nucleic acid metabolic process 13.04% (6/46) 2.87 0.000159 0.003536
GO:0003723 RNA binding 8.7% (4/46) 3.56 0.000364 0.005778
GO:0032774 RNA biosynthetic process 6.52% (3/46) 4.45 0.000349 0.006456
GO:1901360 organic cyclic compound metabolic process 13.04% (6/46) 2.03 0.003309 0.022958
GO:0016741 transferase activity, transferring one-carbon groups 6.52% (3/46) 3.36 0.003129 0.023158
GO:0046483 heterocycle metabolic process 13.04% (6/46) 2.06 0.002952 0.023402
GO:0005488 binding 32.61% (15/46) 1.07 0.002945 0.025142
GO:0009451 RNA modification 4.35% (2/46) 4.42 0.003917 0.025579
GO:0070568 guanylyltransferase activity 2.17% (1/46) 7.59 0.005179 0.026131
GO:0016743 carboxyl- or carbamoyltransferase activity 2.17% (1/46) 7.59 0.005179 0.026131
GO:0030515 snoRNA binding 2.17% (1/46) 7.59 0.005179 0.026131
GO:0008192 RNA guanylyltransferase activity 2.17% (1/46) 7.59 0.005179 0.026131
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 2.17% (1/46) 7.59 0.005179 0.026131
GO:0006725 cellular aromatic compound metabolic process 13.04% (6/46) 2.07 0.002873 0.026579
GO:0006139 nucleobase-containing compound metabolic process 13.04% (6/46) 2.18 0.001954 0.027107
GO:1901363 heterocyclic compound binding 23.91% (11/46) 1.35 0.00285 0.028757
GO:0097159 organic cyclic compound binding 23.91% (11/46) 1.35 0.00285 0.028757
GO:0008193 tRNA guanylyltransferase activity 2.17% (1/46) 8.59 0.002593 0.031979
GO:0034641 cellular nitrogen compound metabolic process 13.04% (6/46) 1.78 0.007555 0.036461
GO:0032040 small-subunit processome 2.17% (1/46) 6.59 0.010332 0.047786
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Angiopteris evecta HCCA Cluster_42 0.022 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_121 0.033 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_6 0.024 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_16 0.021 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_74 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_13 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_155 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_267 0.02 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_139 0.024 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_140 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_34 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_98 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_124 0.021 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_22 0.061 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.038 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_77 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_168 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_142 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_176 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_162 0.031 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_188 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_17 0.024 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_1 0.026 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_54 0.024 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_56 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.031 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_49 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_90 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_142 0.02 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_181 0.025 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_30 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_44 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_62 0.034 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_105 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_59 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_71 0.021 OrthoFinder output from all 47 species Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms