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  5. Sam_g15634

Sam_g15634


Description : not classified & original description: none


Gene families : OG0002416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15634

Target Alias Description ECC score Gene Family Method Actions
Adi_g007692 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g007693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03628 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g12822 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g03874 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.19G035500.1 Ceric.19G035500 not classified & original description: pacid=50575844... 0.05 OrthoFinder output from all 47 species
Ceric.39G032200.1 Ceric.39G032200 not classified & original description: pacid=50583645... 0.05 OrthoFinder output from all 47 species
Ehy_g12588 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01014407001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_00884 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g38730.1 LOC_Os03g38730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g14600.1 LOC_Os09g14600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g31052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30883 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10426793g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g43310 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063430.3.1 Solyc07g063430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g10000 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004901_P001 Zm00001e004901 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012491_P002 Zm00001e012491 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007248 Mpv17_PMP22 302 363
No external refs found!