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  5. Aop_g12318

Aop_g12318


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12318
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Aev_g37451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08012 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g30409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048883 No alias not classified & original description: CDS=392-1735 0.07 OrthoFinder output from all 47 species
Cba_g05855 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.1Z088200.1 Ceric.1Z088200 not classified & original description: pacid=50573450... 0.12 OrthoFinder output from all 47 species
Dac_g01643 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g06987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g07190.1 LOC_Os12g07190 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Lfl_g01913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10616 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g08747 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g09029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20411 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g30087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07739 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Tin_g01050 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 401 482
IPR000644 CBS_dom 113 156
IPR000644 CBS_dom 220 268
IPR000644 CBS_dom 53 99
No external refs found!