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  5. Ala_g05132

Ala_g05132


Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0003525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05132
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00084390 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
AT3G44340 CEF clone eighty-four 0.04 OrthoFinder output from all 47 species
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.04 OrthoFinder output from all 47 species
Adi_g059790 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Als_g15380 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Aob_g10600 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Aspi01Gene00682.t1 CEF, Aspi01Gene00682 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ceric.16G039000.1 Ceric.16G039000 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.3 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Cre01.g035850 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Dac_g16342 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Dcu_g06456 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Dcu_g06486 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.07 OrthoFinder output from all 47 species
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 OrthoFinder output from all 47 species
Gb_38621 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os12g24250.1 CEF, LOC_Os12g24250 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Len_g02389 CEF component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Len_g03398 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Lfl_g26302 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
MA_45050g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
MA_923164g0010 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.07 OrthoFinder output from all 47 species
Mp7g13350.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Msp_g25229 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Nbi_g12383 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Pir_g11399 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ppi_g06491 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.07 OrthoFinder output from all 47 species
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc06g084210.3.1 CEF, Solyc06g084210 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g52344 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Tin_g10861 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Zm00001e021459_P002 CEF, Zm00001e021459 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 454 692
IPR006900 Sec23/24_helical_dom 793 887
IPR007123 Gelsolin-like_dom 914 980
IPR012990 Sec23_24_beta_S 698 781
IPR006895 Znf_Sec23_Sec24 379 417
No external refs found!