Aliases : VALRS, TWN2
Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none
Gene families : OG0001685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g05237 | |
Cluster | HCCA: Cluster_181 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00143390 | EMB2247,... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00038p00088230 | VALRS, TWN2,... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
AT1G14610 | VALRS, TWN2 | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) | 0.03 | OrthoFinder output from all 47 species | |
Ala_g11536 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Als_g14687 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.12G097300.1 | VALRS, TWN2,... | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001130.5 | VALRS, TWN2 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
Cre07.g350500 | EMB2247 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g537100 | VALRS, TWN2 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g09644 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g21392 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g26392 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01030776001 | EMB2247 | Valine--tRNA ligase, chloroplastic/mitochondrial 2... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g48850.1 | VALRS, TWN2,... | valine-tRNA ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os07g06940.1 | EMB2247, LOC_Os07g06940 | valine-tRNA ligase | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08398 | EMB2247 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_10426363g0020 | VALRS, TWN2 | valine-tRNA ligase | 0.03 | OrthoFinder output from all 47 species | |
Msp_g01242 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g34796 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g33649 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g10604 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Smo141956 | VALRS, TWN2 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e010301_P002 | VALRS, TWN2,... | valine-tRNA ligase | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e011483_P001 | EMB2247, Zm00001e011483 | valine-tRNA ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No external refs found! |