GSVIVT01038381001


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01038381001
Cluster HCCA cluster: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Gene family
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
LOC_Os07g20420 Os07g0299800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_14938g0010 No alias No description available 0.02 Gene family
MA_286190g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_86894g0010 No alias No description available 0.02 Gene family
MA_953793g0020 No alias No description available 0.03 Gene family
Smo105356 PACid_15414251 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo130420 PACid_15421724 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo30095 PACid_15411160 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc03g098420.3.1 Solyc03g098420.3 No description available 0.03 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.02 Gene family
Zm00001d025870 GRMZM5G827485 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 149 181
IPR002885 Pentatricopeptide_repeat 281 328
IPR002885 Pentatricopeptide_repeat 356 380
IPR002885 Pentatricopeptide_repeat 183 209
IPR002885 Pentatricopeptide_repeat 28 56
IPR002885 Pentatricopeptide_repeat 255 277
IPR002885 Pentatricopeptide_repeat 1 20
IPR002885 Pentatricopeptide_repeat 90 115
IPR002885 Pentatricopeptide_repeat 59 88
IPR002885 Pentatricopeptide_repeat 117 147
No external refs found!