Spa_g56622 (UNE6)

Aliases : UNE6

Description : pre-mRNA-processing protein *(LUC7) & original description: none

Gene families : OG0004423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004423_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g56622

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020534	No alias	pre-mRNA-processing protein *(LUC7) & original description: none	0.07	OrthoFinder output from all 47 species
Als_g10910	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05756	No alias	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12075	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0065.g035861	UNE6	pre-mRNA-processing protein *(LUC7) & original...	0.03	OrthoFinder output from all 47 species
Cba_g14861	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.21G019300.1	UNE6, Ceric.21G019300	pre-mRNA-processing protein *(LUC7) & original...	0.03	OrthoFinder output from all 47 species
Dac_g00719	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g32033	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g17758	No alias	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019063001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Len_g13770	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09785	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
MA_79834g0010	UNE6	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp7g03530.1	UNE6	pre-mRNA-processing protein (LUC7)	0.03	OrthoFinder output from all 47 species
Pir_g11730	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03747	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g15791	No alias	pre-mRNA-processing protein *(LUC7) & original description: none	0.02	OrthoFinder output from all 47 species
Smo151152	UNE6	No description available	0.02	OrthoFinder output from all 47 species
Solyc05g056280.2.1	Solyc05g056280	pre-mRNA-processing protein (LUC7)	0.03	OrthoFinder output from all 47 species
Zm00001e006322_P004	Zm00001e006322	pre-mRNA-processing protein (LUC7)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005685	U1 snRNP	IEA	Interproscan
BP	GO:0006376	mRNA splice site selection	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
CC	GO:0030532	small nuclear ribonucleoprotein complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097525	spliceosomal snRNP complex	None	Extended
CC	GO:0120114	Sm-like protein family complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004827	proline-tRNA ligase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016229	steroid dehydrogenase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004882	Luc7-rel	2	171
IPR004882	Luc7-rel	207	323

External Links

No external refs found!

Spa_g56622 (UNE6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation