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GO:0120114: Sm-like protein family complex (Cellular component)

"A protein complex containing members of the Like-Sm family of proteins, which includes both the Sm proteins and the Lsm proteins, and which generally form hexameric or heptameric ring structures which bind to RNA. While some of these ring complexes may form independently of RNA, many only form in association with their target RNA. In addition to Lsm-family proteins, many of these complexes contain additional protein members. Members of this family of complexes include the snRNPs which comprise the majority of the spliceosome. Others are involved in the 5' to 3' degradation pathways of mRNAs in the cytoplasm and of unspliced transcripts in the nucleus, as well as other diverse roles." [GOC:bhm, GOC:krc, PMID:19121818, PMID:27627834]


There are 4025 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_254 Abrodictyum obscurum 11.11 % 0.001867 0.033604
Cluster_150 Abrodictyum obscurum 1.61 % 0.012798 0.034043
Cluster_299 Actinostachys digitata 2.38 % 0.005146 0.04585
Cluster_555 Alsophila latebrosa 50.0 % 0.000311 0.00193
Cluster_141 Cibotium barometz 1.14 % 0.000507 0.00362
Cluster_57 Dicranopteris curranii 1.06 % 0.000708 0.003964
Cluster_16 Gingko biloba 1.33 % 0.009045 0.040971
Cluster_13 Lygodium flexuosum 2.44 % 0.007914 0.045821
Cluster_5 Microlepia speluncae 2.33 % 0.004384 0.032537
Cluster_376 Oryza sativa 33.33 % 0.000427 0.001333
Cluster_13 Picea abies 1.67 % 0.008969 0.032637
Cluster_360 Pleocnemia irregularis 9.09 % 0.002962 0.025473
Cluster_80 Physcomitrella patens 0.57 % 0.010816 0.036412
Cluster_39 Physcomitrella patens 1.59 % 0.003878 0.023269
Cluster_129 Zea mays 1.82 % 0.007912 0.029545
Sequences (4025) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro Domains

Family Terms