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  5. Ore_g37642

Ore_g37642 (EST3, MRP4, ATMRP4, ABCC4)


Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37642

Target Alias Description ECC score Gene Family Method Actions
Ala_g21516 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11934 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27922 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene13119.t1 MRP11, ABCC13,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41842.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64352.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025598 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000681.7 ABCC1, ATABCC1,... ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g15584 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36989 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09221 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24095 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02964 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04046 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426119g0010 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10434414g0010 ABCC1, ATABCC1,... ABC transporter C family member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10434717g0010 ATABCC5, MRP5,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
MA_685468g0010 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g14395 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008921 ATABCC5, MRP5,... subfamily ABCC transporter & original description: CDS=494-5017 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010393 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: CDS=2-4279 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020291 ABCC12, MRP13, ATMRP13 glutathione S-conjugate transporter & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025351 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: CDS=562-5160 0.02 OrthoFinder output from all 47 species
Sam_g14005 No alias subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo267218 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo267271 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc08g006880.3.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Tin_g02195 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17475 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000347_P001 ATABCC5, MRP5,... subfamily ABCC transporter 0.01 OrthoFinder output from all 47 species
Zm00001e003542_P001 ATMRP14, ABCC10,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Zm00001e036442_P001 ATMRP14, ABCC10,... subfamily ABCC transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 642 774
IPR003439 ABC_transporter-like_ATP-bd 1283 1430
IPR011527 ABC1_TM_dom 311 578
IPR011527 ABC1_TM_dom 951 1189
No external refs found!