Ore_g05454 (HEMB1)

Aliases : HEMB1

Description : EC_4.2 carbon-oxygen lyase & original description: none

Gene families : OG0006175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006175_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g05454

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00259220	HEMB1,...	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
Adi_g020743	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g07164	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g29890	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06542	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09956	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0077.g037965	HEMB1	EC_4.2 carbon-oxygen lyase & original description: CDS=83-1387	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001154.8	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
Cre02.g091050	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
GSVIVT01008851001	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
Len_g21693	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g07323	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.05	OrthoFinder output from all 47 species
Mp1g22820.1	HEMB1	porphobilinogen synthase	0.08	OrthoFinder output from all 47 species
Pir_g04541	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g27107	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g06304	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000572	HEMB1	EC_4.2 carbon-oxygen lyase & original description: CDS=52-1308	0.03	OrthoFinder output from all 47 species
Sam_g23811	No alias	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Smo441909	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
Solyc08g069030.4.1	HEMB1, Solyc08g069030	porphobilinogen synthase	0.03	OrthoFinder output from all 47 species
Zm00001e013205_P001	HEMB1, Zm00001e013205	porphobilinogen synthase	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004655	porphobilinogen synthase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0009975	cyclase activity	IEP	HCCA
MF	GO:0009976	tocopherol cyclase activity	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0010242	oxygen evolving activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001731	ALAD	94	411

External Links

No external refs found!

Ore_g05454 (HEMB1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation