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  5. Ore_g03428

Ore_g03428 (LON2)


Aliases : LON2

Description : LON-type protease & original description: none


Gene families : OG0001871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03428

Target Alias Description ECC score Gene Family Method Actions
Adi_g085048 LON2 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107928 LON2 LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21678 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g18702 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71901.t1 LON2, Aspi01Gene71901 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre06.g281350 LON_ARA_ARA, LON1 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Dac_g22017 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g36300.1 LON2, LOC_Os09g36300 protease (LON) 0.02 OrthoFinder output from all 47 species
Lfl_g02290 LON2 LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434689g0010 LON_ARA_ARA, LON1 Lon protease homolog, mitochondrial OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_159707g0010 LON2 protease (LON) 0.03 OrthoFinder output from all 47 species
MA_68108g0010 LON2 protease (LON) 0.03 OrthoFinder output from all 47 species
MA_9793869g0010 LON2 protease (LON) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008460 LON2 LON-type protease & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sam_g25358 No alias LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10907 LON2 LON-type protease & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e034816_P001 LON2, Zm00001e034816 protease (LON) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003111 Lon_prtase_N 11 253
IPR003959 ATPase_AAA_core 405 542
IPR008269 Lon_proteolytic 669 875
No external refs found!