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  5. AMTR_s00044p00131190

AMTR_s00044p00131190 (GAPB,...)


Aliases : GAPB, evm_27.TU.AmTr_v1.0_scaffold00044.119

Description : Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase


Gene families : OG0002048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00131190

Target Alias Description ECC score Gene Family Method Actions
AT1G12900 GAPA-2 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.08 OrthoFinder output from all 47 species
AT1G42970 GAPB glyceraldehyde-3-phosphate dehydrogenase B subunit 0.09 OrthoFinder output from all 47 species
AT3G26650 GAPA-1, GAPA glyceraldehyde 3-phosphate dehydrogenase A subunit 0.09 OrthoFinder output from all 47 species
Adi_g059895 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Adi_g059896 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.11 OrthoFinder output from all 47 species
Adi_g081327 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.09 OrthoFinder output from all 47 species
Adi_g115138 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.09 OrthoFinder output from all 47 species
Aev_g03909 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Aev_g33941 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Ala_g01635 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.09 OrthoFinder output from all 47 species
Ala_g12290 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.02 OrthoFinder output from all 47 species
Als_g05500 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.07 OrthoFinder output from all 47 species
Als_g11767 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.07 OrthoFinder output from all 47 species
Als_g13012 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Aob_g06524 GAPA-1, GAPA EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.04 OrthoFinder output from all 47 species
Aob_g10288 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Aob_g31124 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Aop_g11655 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Aop_g14255 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Aspi01Gene02247.t1 GAPA-2, Aspi01Gene02247 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Aspi01Gene22666.t1 GAPA-2, Aspi01Gene22666 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24116.t1 GAPB, Aspi01Gene24116 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Azfi_s0032.g024904 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Azfi_s0158.g053908 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Cba_g09116 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Cba_g17286 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Cba_g29846 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Cba_g32168 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.1 OrthoFinder output from all 47 species
Ceric.21G047500.1 GAPA-2, Ceric.21G047500 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.1 OrthoFinder output from all 47 species
Ceric.26G001300.1 GAPA-2, Ceric.26G001300 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.09 OrthoFinder output from all 47 species
Ceric.32G068400.1 GAPB, Ceric.32G068400 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.36 GAPA-1, GAPA Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.04 OrthoFinder output from all 47 species
Cre01.g010900 GAPB Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.08 OrthoFinder output from all 47 species
Dac_g00701 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Dac_g16762 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.1 OrthoFinder output from all 47 species
Dcu_g06232 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Dcu_g16513 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.02 OrthoFinder output from all 47 species
Dcu_g16770 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Dde_g09729 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Dde_g21271 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.09 OrthoFinder output from all 47 species
Ehy_g19299 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Ehy_g22428 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
GSVIVT01013403001 GAPB Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.08 OrthoFinder output from all 47 species
GSVIVT01032942001 GAPA-2 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.05 OrthoFinder output from all 47 species
Gb_27252 GAPB glyceraldehyde 3-phosphate dehydrogenase 0.1 OrthoFinder output from all 47 species
Gb_37897 GAPA-1, GAPA glyceraldehyde 3-phosphate dehydrogenase 0.1 OrthoFinder output from all 47 species
LOC_Os03g03720.1 GAPB, LOC_Os03g03720 glyceraldehyde 3-phosphate dehydrogenase 0.06 OrthoFinder output from all 47 species
LOC_Os04g38600.1 GAPA-2, LOC_Os04g38600 glyceraldehyde 3-phosphate dehydrogenase 0.1 OrthoFinder output from all 47 species
Len_g13750 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.11 OrthoFinder output from all 47 species
Len_g22369 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.1 OrthoFinder output from all 47 species
Len_g27961 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.07 OrthoFinder output from all 47 species
Lfl_g08248 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
MA_63231g0010 GAPA-2 glyceraldehyde 3-phosphate dehydrogenase 0.04 OrthoFinder output from all 47 species
MA_69727g0010 GAPB glyceraldehyde 3-phosphate dehydrogenase 0.08 OrthoFinder output from all 47 species
Mp2g19370.1 GAPB glyceraldehyde 3-phosphate dehydrogenase 0.09 OrthoFinder output from all 47 species
Mp7g06610.1 GAPA-2 glyceraldehyde 3-phosphate dehydrogenase 0.06 OrthoFinder output from all 47 species
Msp_g06999 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Nbi_g01105 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Nbi_g11595 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Ore_g10994 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Pir_g08787 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Pir_g11639 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Pp3c11_15790V3.1 GAPA-2, Pp3c11_15790 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.03 OrthoFinder output from all 47 species
Pp3c7_14220V3.1 GAPA-2, Pp3c7_14220 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.01 OrthoFinder output from all 47 species
Ppi_g32692 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000831 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Sam_g06535 No alias EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Sam_g06536 No alias EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Sam_g08786 No alias EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.06 OrthoFinder output from all 47 species
Smo270825 GAPA-2 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.08 OrthoFinder output from all 47 species
Smo271457 GAPB Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.07 OrthoFinder output from all 47 species
Solyc02g020940.3.1 GAPA-2, Solyc02g020940 glyceraldehyde 3-phosphate dehydrogenase 0.09 OrthoFinder output from all 47 species
Solyc04g009030.3.1 GAPA-1, GAPA,... glyceraldehyde 3-phosphate dehydrogenase 0.07 OrthoFinder output from all 47 species
Spa_g06582 GAPA-2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.07 OrthoFinder output from all 47 species
Spa_g06619 GAPB EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.07 OrthoFinder output from all 47 species
Tin_g00678 GAPA-2 EC_1.2 oxidoreductase acTing on aldehyde or oxo group of... 0.12 OrthoFinder output from all 47 species
Tin_g05974 GAPB EC_1.2 oxidoreductase acTing on aldehyde or oxo group of... 0.08 OrthoFinder output from all 47 species
Zm00001e007914_P001 GAPA-2, Zm00001e007914 Glyceraldehyde-3-phosphate dehydrogenase A,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020828 GlycerAld_3-P_DH_NAD(P)-bd 49 201
IPR003823 CP12_dom 389 412
IPR020829 GlycerAld_3-P_DH_cat 206 363
No external refs found!