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Aliases : TPR16
Description : TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana
Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01005044001 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G41520 | TPR15 | Heat shock protein DnaJ with tetratricopeptide repeat | 0.04 | OrthoFinder output from all 47 species | |
| AT5G12430 | TPR16 | Heat shock protein DnaJ with tetratricopeptide repeat | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069297 | TPR16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g12835 | TPR16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04505 | TPR16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33144 | TPR16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene51537.t1 | TPR16, Aspi01Gene51537 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene51539.t1 | TPR16, Aspi01Gene51539 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G058300.1 | TPR16, Ceric.28G058300 | not classified & original description: pacid=50570376... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g108800 | TPR16 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02947 | TPR16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15691 | TPR16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g31056.1 | TPR16, LOC_Os05g31056 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g31062.1 | TPR16, LOC_Os05g31062 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02472 | TPR16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_7383g0010 | TPR16 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g16220.1 | TPR16 | TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05014 | TPR16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35893 | TPR16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g36194 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016410.3.1 | TPR16, Solyc04g016410 | TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e026765_P001 | Zm00001e026765 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031378_P001 | TPR16, Zm00001e031378 | TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001623 | DnaJ_domain | 1429 | 1512 |
| No external refs found! |