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  5. Pp3c13_8400V3.1

Pp3c13_8400V3.1 (Pp3c13_8400)


Aliases : Pp3c13_8400

Description : Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)


Gene families : OG0003519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_8400V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00206060 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
AT5G44320 No alias Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0.02 OrthoFinder output from all 47 species
Aop_g02560 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.05G054900.1 Ceric.05G054900 component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Cre05.g242300 No alias Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
GSVIVT01002790001 No alias Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Ore_g10940 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Ore_g40662 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Solyc02g078120.2.1 Solyc02g078120 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder output from all 47 species
Zm00001e032448_P001 Zm00001e032448 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007783 eIF3d 10 506
No external refs found!