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  5. Cpa|evm.model.tig00001181.31

Cpa|evm.model.tig00001181.31


Description : Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase


Gene families : OG0003715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001181.31
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT2G37690 No alias phosphoribosylaminoimidazole carboxylase, putative / AIR... 0.01 OrthoFinder output from all 47 species
Adi_g056649 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.03 OrthoFinder output from all 47 species
Als_g02512 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.02 OrthoFinder output from all 47 species
Aop_g00714 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0009.g011988 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.02 OrthoFinder output from all 47 species
Cre12.g503300 No alias Nucleotide metabolism.purines.ribonucleotide (RN)... 0.02 OrthoFinder output from all 47 species
Len_g00693 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.01 OrthoFinder output from all 47 species
Nbi_g02240 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.01 OrthoFinder output from all 47 species
Sam_g37908 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.01 OrthoFinder output from all 47 species
Smo121407 No alias Nucleotide metabolism.purines.ribonucleotide (RN)... 0.04 OrthoFinder output from all 47 species
Solyc11g006340.2.1 Solyc11g006340 aminoimidazole RN carboxylase 0.01 OrthoFinder output from all 47 species
Tin_g02033 No alias aminoimidazole RN carboxylase *(PUR6) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006189 'de novo' IMP biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000031 PurE_dom 443 511
IPR000031 PurE_dom 507 555
IPR003135 ATP-grasp_carboxylate-amine 301 361
IPR003135 ATP-grasp_carboxylate-amine 219 270
No external refs found!