Cpa|evm.model.tig00000903.26

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3j component

Gene families : OG0003438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000903.26
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0315.g064288	No alias	component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &...	0.02	OrthoFinder output from all 47 species
Cba_g06863	No alias	component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &...	0.02	OrthoFinder output from all 47 species
Cre06.g308850	No alias	Protein biosynthesis.translation...	0.03	OrthoFinder output from all 47 species
Len_g10217	No alias	component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &...	0.05	OrthoFinder output from all 47 species
Nbi_g38770	No alias	component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &...	0.02	OrthoFinder output from all 47 species
Tin_g00564	No alias	component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013906	eIF3j	6	232

External Links

No external refs found!