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  5. Cpa|evm.model.tig00000169.10

Cpa|evm.model.tig00000169.10 (EMB2761)


Aliases : EMB2761

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase


Gene families : OG0001675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000169.10
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00165940 EMB2761,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
AT2G04842 EMB2761 threonyl-tRNA synthetase, putative / threonine--tRNA... 0.03 OrthoFinder output from all 47 species
Ala_g26881 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Aop_g02242 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene57585.t1 EMB2761, Aspi01Gene57585 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Cba_g26634 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Cre10.g421600 EMB2761 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dac_g13016 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g12871 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18743 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01020206001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Gb_06729 EMB2761 threonine-tRNA ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g33500.1 EMB2761, LOC_Os02g33500 threonine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Len_g00719 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
MA_10435490g0010 EMB2761 Threonine--tRNA ligase, chloroplastic/mitochondrial 2... 0.01 OrthoFinder output from all 47 species
Mp1g09670.1 EMB2761 threonine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Mp1g23020.1 No alias threonine-tRNA ligase 0.01 OrthoFinder output from all 47 species
Msp_g25058 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Pir_g17574 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g08690 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020374 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Tin_g29689 EMB2761 EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Zm00001e035402_P001 EMB2761, Zm00001e035402 threonine-tRNA ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 585 682
IPR012947 tRNA_SAD 204 256
IPR002314 aa-tRNA-synt_IIb 368 573
No external refs found!