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Heatmap: Cluster_73 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
1.04 -0.44 -0.52 -0.52 -1.1 -1.61 -0.37 0.05 -0.6 0.03 0.58 0.45 0.84 0.22 -0.51 -1.15 -0.41 0.55 0.11 -0.18 -1.51 -1.19 0.59 0.13 0.79 0.32
0.54 1.15 0.41 -0.62 -2.66 -3.84 -1.6 -0.38 0.2 0.21 0.99 1.2 0.98 -1.74 -1.91 -2.06 -1.03 -0.36 -1.3 -0.88 -3.22 -1.5 0.97 0.55 1.27 0.18
0.76 0.9 0.29 -0.46 -1.07 -0.92 -0.23 0.14 0.18 0.23 0.35 0.37 0.54 -0.17 -0.46 -0.58 -0.23 -0.37 -0.73 -0.32 -1.11 -1.02 0.58 0.07 0.38 0.1
0.49 -0.17 -0.99 -0.01 -0.77 0.04 -0.04 0.04 -0.17 -0.35 -0.06 -0.11 -0.37 -0.58 -1.09 -0.31 -1.39 0.47 0.37 -1.08 -2.42 -0.23 1.23 -0.03 1.63 0.42
1.0 0.8 0.09 -0.68 -1.53 -1.55 -0.3 0.24 0.04 0.13 0.42 0.65 0.78 -0.73 -0.82 -0.9 -0.24 -0.16 -0.69 -0.36 -2.02 -0.22 0.15 -0.02 1.0 0.13
0.33 -0.22 -0.29 -0.24 -0.21 -0.13 -0.21 -0.23 -0.16 0.08 0.38 0.34 0.63 0.03 -0.16 0.01 -0.46 0.19 -0.23 -0.65 -3.75 -1.35 -0.06 0.5 1.19 0.32
0.85 0.95 0.1 -0.77 -1.14 -0.73 0.01 0.29 0.39 0.46 0.57 0.64 0.57 -0.25 -1.45 -0.97 -0.13 -0.04 -0.73 -0.15 -2.3 -0.27 -0.29 0.27 0.16 -0.3
0.64 0.81 -0.15 -0.96 -1.36 -0.62 -0.14 0.06 0.26 0.21 0.3 0.49 0.51 -0.42 -1.28 -0.81 -0.27 -0.39 -0.62 -0.43 -1.2 0.29 -0.02 0.82 0.76 0.07
0.67 0.71 -0.01 -0.69 -1.02 -0.35 -0.08 0.18 0.44 0.39 0.58 0.71 0.78 -0.51 -1.34 -0.7 -0.43 -0.63 -0.85 -0.62 -1.08 -0.2 0.04 0.37 0.54 -0.2
0.29 -0.52 -0.59 -0.35 -0.31 -0.36 -0.09 -0.14 -0.07 0.45 0.7 0.69 0.25 -0.07 -0.46 -0.25 -0.89 0.25 -0.24 -0.45 -2.13 -0.1 0.21 0.27 0.94 0.25
0.69 0.84 -0.11 -0.99 -1.33 -0.58 -0.18 -0.1 0.13 0.3 0.37 0.7 0.55 -0.13 -0.71 -0.78 0.2 -0.3 -0.16 0.06 -1.89 -0.56 0.01 0.71 -0.11 0.09
-0.22 -2.67 -2.49 -1.85 -0.66 -0.31 0.24 0.17 0.44 0.67 0.72 0.6 0.35 -0.81 -0.8 -1.13 -0.41 0.13 -0.44 -0.01 -2.08 -2.45 0.7 1.04 1.41 0.55
1.01 -1.93 -4.89 -5.81 -1.22 -0.59 0.85 0.59 0.46 -0.02 0.04 -1.21 0.53 -1.84 -3.0 - -1.77 -0.07 -1.18 -1.38 -1.4 -2.43 1.66 1.17 2.09 0.38
0.73 0.76 0.07 -0.38 -1.07 -0.51 -0.27 0.18 0.33 0.15 0.39 0.72 0.65 -1.73 -2.46 -2.27 -1.6 -0.64 -1.66 -1.33 -0.97 0.36 0.79 1.02 0.96 -0.1
0.54 -0.44 -1.04 -0.95 -0.47 -0.47 0.08 0.33 0.15 -0.03 0.15 -0.08 -0.09 -0.15 -0.63 -0.56 -0.35 0.26 -0.15 -0.4 -2.5 -0.49 1.0 0.51 1.25 0.48
-0.01 -0.16 -0.46 -0.8 -1.18 -1.29 -0.17 -0.14 -0.27 -0.04 0.24 0.49 0.57 0.17 -0.16 -0.09 0.0 0.46 0.28 -0.14 -2.06 -0.18 0.51 0.47 0.75 0.3
0.16 -0.73 -1.97 -1.43 -1.43 -0.54 0.24 0.4 0.46 0.74 0.57 0.29 0.25 -1.44 -1.06 -0.89 -1.16 0.32 -0.27 -0.79 -2.24 -0.69 0.99 0.35 1.55 0.7
0.77 0.81 0.12 -0.64 -0.89 -0.43 0.03 0.2 0.38 0.39 0.5 0.58 0.78 -0.22 -1.14 -0.38 -0.33 -0.41 -0.84 -0.45 -1.48 0.07 -0.22 -0.08 0.33 -0.4
0.61 -2.19 -3.31 -1.41 -1.65 -1.63 0.0 0.54 0.38 0.33 0.42 -0.12 0.11 -2.01 -1.33 -1.72 -1.18 0.54 -0.85 -1.06 -2.17 -0.69 1.9 0.46 1.98 0.01
0.77 0.84 0.03 -0.71 -1.02 -0.25 0.09 0.27 0.45 0.28 0.39 0.56 0.74 -0.17 -1.18 -0.44 -0.34 -0.81 -0.8 -0.52 -1.57 -0.51 0.41 0.17 0.26 -0.24
0.62 -0.83 -1.35 -1.29 -1.27 -0.63 0.03 0.28 0.12 0.37 0.41 0.23 0.68 0.21 -0.38 -0.4 -0.92 0.24 0.05 -0.43 -1.72 -0.96 0.84 0.55 0.49 0.74
0.73 1.2 0.65 -0.0 -0.65 -0.99 -0.6 -0.17 -0.07 0.02 0.33 0.66 0.3 -0.93 -0.71 -1.87 -0.47 -0.1 -0.5 -0.1 -0.94 -0.27 0.63 0.29 0.14 -0.29
0.7 0.96 0.24 -0.5 -1.7 -1.89 -0.73 -0.01 0.17 0.36 0.74 0.75 0.32 -0.67 -0.52 -1.45 -0.74 -0.37 -0.72 -0.57 -1.81 -0.68 0.98 0.54 0.71 0.07
0.36 0.88 0.53 0.24 -0.06 -0.67 -0.91 -0.5 -0.19 -0.01 0.38 0.62 0.14 -0.77 -0.92 -1.23 -0.42 -0.55 -0.66 0.05 -0.7 -0.08 0.75 0.83 -0.05 -0.04
-0.26 -1.09 -1.97 -1.33 -2.05 -1.86 -0.31 0.36 0.23 0.43 0.44 0.31 0.35 0.44 -0.37 0.04 -0.03 0.4 0.19 -0.19 -2.45 -0.74 0.24 0.27 1.56 0.53
0.88 1.16 0.26 -0.61 -1.16 -0.84 -0.12 0.08 0.18 0.24 0.25 0.37 0.7 -0.49 -1.02 -0.71 0.05 0.1 -0.46 -0.05 -2.53 0.13 -0.72 -0.05 0.47 -0.24
0.66 -1.15 -2.27 -2.83 -2.89 -2.17 -0.12 0.24 0.01 0.53 0.62 0.49 0.21 -0.62 -1.16 -1.2 -0.98 0.45 -0.04 -0.7 -0.62 -1.59 0.8 1.19 1.46 0.89
0.66 -0.99 -2.69 -2.86 -3.24 -2.74 -0.06 0.27 -0.31 0.43 0.46 0.26 0.32 -0.17 -0.25 -0.56 -0.39 0.74 0.52 0.09 -0.96 -0.83 0.67 1.18 0.38 0.73
-0.5 -0.68 -1.46 -0.58 -0.93 -1.29 -0.35 0.18 0.45 0.5 0.66 0.23 -0.47 -0.29 -0.4 -0.07 -0.5 0.32 0.12 -0.48 -2.58 -0.85 0.87 1.02 1.26 0.35
1.06 0.22 -0.64 -1.49 -1.8 -0.96 0.15 0.48 0.14 0.5 0.6 0.56 0.73 -0.94 -2.75 -2.18 -0.82 -0.02 -0.65 -0.04 -1.55 -1.85 0.71 0.53 1.0 0.62
0.69 1.08 0.16 -0.66 -1.09 -0.59 -0.22 -0.02 0.13 -0.09 -0.08 0.25 0.57 -0.66 -1.29 -0.67 -0.18 -0.08 -0.32 -0.47 -0.85 0.29 -0.42 0.46 0.9 0.15
-0.45 -0.22 -0.45 -0.53 -0.49 -0.3 0.0 -0.08 0.48 0.49 0.49 0.37 -0.32 -0.46 -0.48 -0.1 -0.45 0.29 0.01 -0.25 -0.79 -2.22 0.31 0.76 0.94 0.47
0.45 0.84 0.22 -0.46 -0.89 -1.05 -0.38 -0.08 0.07 0.2 0.45 0.66 0.09 -1.04 -0.74 -1.09 -0.2 -0.14 -0.21 -0.22 -0.88 -0.32 1.11 0.52 0.5 -0.73
0.05 -1.42 -1.57 -1.15 -1.85 -1.41 0.17 0.09 1.05 0.89 1.1 0.31 -0.12 -0.26 -0.58 -1.48 -1.06 -0.14 -1.0 -1.12 -2.91 -3.2 1.39 1.07 1.34 0.01
0.71 0.9 -0.02 -0.79 -1.0 -0.41 -0.06 0.11 0.18 0.12 0.22 0.35 0.55 -0.17 -1.3 -0.89 -0.16 -0.34 -0.77 -0.53 -1.46 0.32 0.29 0.38 0.74 -0.11
1.0 -0.18 -1.19 -1.4 -1.24 -1.12 -0.06 0.24 0.11 0.35 0.42 0.69 0.85 -0.54 -1.32 -1.13 -0.51 -0.16 -0.71 -0.23 -1.46 -1.23 0.79 0.21 1.24 0.61
0.82 0.98 0.12 -0.76 -1.09 -0.49 0.08 0.21 0.31 0.28 0.33 0.51 0.65 0.09 -0.93 -0.5 0.19 -0.23 -0.29 -0.06 -2.44 -0.58 -1.02 0.02 0.29 -0.27
0.22 -0.24 -0.22 -0.04 0.16 -0.22 0.18 0.2 0.06 0.21 0.29 0.39 0.52 -0.04 -0.48 -0.18 -0.76 -0.15 -0.34 -0.44 -2.05 -0.06 0.05 0.18 0.47 0.47
0.44 -0.01 -0.13 0.0 -0.14 -0.8 -0.19 -0.0 -0.24 0.28 0.43 0.54 0.35 0.35 -0.86 -0.26 -0.36 0.14 -0.13 0.06 -1.16 -0.48 0.12 -0.24 0.53 0.27
0.73 0.89 0.59 0.19 -0.38 -0.67 -0.57 -0.27 -0.19 -0.03 0.39 0.66 0.98 -0.77 -0.7 -0.61 -0.69 -0.62 -0.66 -0.67 -3.05 -1.5 0.91 0.12 0.71 -0.41
1.04 1.0 0.11 -0.7 -1.33 -0.92 -0.55 -0.34 -0.01 0.27 0.57 0.99 0.82 -0.29 -1.6 -0.48 -0.17 -0.5 -0.73 -0.4 -2.3 -0.23 -0.49 0.44 0.48 0.1
1.31 0.96 0.17 -1.17 -1.05 0.08 0.19 0.11 -0.29 0.46 0.74 0.65 1.11 -0.16 -1.45 -1.0 -0.6 -0.76 -0.72 -0.61 -3.15 -5.39 -0.2 -0.44 0.68 0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.