AT5G08280 (HEMC)


Aliases : HEMC

Description : hydroxymethylbilane synthase


Gene families : OG0006007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00091590 HEMC,... Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder output from all 47 species
Adi_g025619 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Aev_g43043 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Als_g31752 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Aop_g06887 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.11 OrthoFinder output from all 47 species
Azfi_s0083.g038862 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.12 OrthoFinder output from all 47 species
Cba_g01874 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Ceric.01G124300.1 HEMC, Ceric.01G124300 EC_2.5 transferase transferring alkyl or aryl group,... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.50 HEMC Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder output from all 47 species
Cre16.g663900 HEMC Coenzyme metabolism.tetrapyrrol... 0.07 OrthoFinder output from all 47 species
Dde_g10954 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Ehy_g02315 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
GSVIVT01002505001 HEMC Coenzyme metabolism.tetrapyrrol... 0.24 OrthoFinder output from all 47 species
Gb_08885 HEMC porphobilinogen deaminase 0.17 OrthoFinder output from all 47 species
LOC_Os02g07230.1 HEMC, LOC_Os02g07230 porphobilinogen deaminase 0.22 OrthoFinder output from all 47 species
Len_g01736 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Lfl_g19302 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
MA_10437242g0030 HEMC porphobilinogen deaminase 0.12 OrthoFinder output from all 47 species
Mp2g07740.1 HEMC porphobilinogen deaminase 0.26 OrthoFinder output from all 47 species
Msp_g07842 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Nbi_g10234 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.14 OrthoFinder output from all 47 species
Ore_g05338 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Pnu_g14860 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Ppi_g12249 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Sam_g39580 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Smo164683 HEMC Coenzyme metabolism.tetrapyrrol... 0.1 OrthoFinder output from all 47 species
Solyc07g066470.3.1 HEMC, Solyc07g066470 porphobilinogen deaminase 0.09 OrthoFinder output from all 47 species
Spa_g26836 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Spa_g26837 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.15 OrthoFinder output from all 47 species
Spa_g51870 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.14 OrthoFinder output from all 47 species
Tin_g13290 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Zm00001e013727_P001 HEMC, Zm00001e013727 porphobilinogen deaminase 0.19 OrthoFinder output from all 47 species
Zm00001e025155_P001 HEMC, Zm00001e025155 porphobilinogen deaminase 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IDA Interproscan
MF GO:0004418 hydroxymethylbilane synthase activity IMP Interproscan
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0006744 ubiquinone biosynthetic process RCA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process TAS Interproscan
BP GO:0009073 aromatic amino acid family biosynthetic process RCA Interproscan
BP GO:0009409 response to cold RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009697 salicylic acid biosynthetic process RCA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process TAS Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0030154 cell differentiation RCA Interproscan
BP GO:0042742 defense response to bacterium IEP Interproscan
BP GO:0042742 defense response to bacterium RCA Interproscan
BP GO:0045893 positive regulation of DNA-templated transcription RCA Interproscan
CC GO:0048046 apoplast IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
CC GO:0010007 magnesium chelatase complex IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016869 intramolecular transferase activity, transferring amino groups IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0032544 plastid translation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 301 372
IPR022417 Porphobilin_deaminase_N 75 286
No external refs found!