AT3G13510

Description : Protein of Unknown Function (DUF239)

Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G13510

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00068p00062100	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00085p00068720	evm_27.TU.AmTr_v1...	No description available	0.06	OrthoFinder output from all 47 species
AMTR_s00120p00051630	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT4G23355	No alias	No description available	0.05	OrthoFinder output from all 47 species
AT5G25950	No alias	Protein of Unknown Function (DUF239)	0.04	OrthoFinder output from all 47 species
Adi_g031146	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g072910	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g109614	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20170	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g09383	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07752	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g13264	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10001	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g18962	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02717.t1	Aspi01Gene02717	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02720.t1	Aspi01Gene02720	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32102.t1	Aspi01Gene32102	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene38492.t1	Aspi01Gene38492	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene42673.t1	Aspi01Gene42673	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene59815.t1	Aspi01Gene59815	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0109.g045324	No alias	not classified & original description: CDS=108-1337	0.04	OrthoFinder output from all 47 species
Azfi_s0280.g062318	No alias	not classified & original description: CDS=377-1795	0.02	OrthoFinder output from all 47 species
Cba_g73343	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.09G061800.1	Ceric.09G061800	not classified & original description: pacid=50587848...	0.04	OrthoFinder output from all 47 species
Ceric.21G046500.1	Ceric.21G046500	not classified & original description: pacid=50603415...	0.08	OrthoFinder output from all 47 species
Ceric.26G037500.1	Ceric.26G037500	not classified & original description: pacid=50599180...	0.04	OrthoFinder output from all 47 species
Dac_g09610	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dac_g16551	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g35636	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g06263	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g43835	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g14959	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01019797001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01026924001	No alias	No description available	0.04	OrthoFinder output from all 47 species
Gb_36043	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g07570.1	LOC_Os01g07570	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os01g36660.1	LOC_Os01g36660	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os03g59240.1	LOC_Os03g59240	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
LOC_Os04g12639.1	LOC_Os04g12639	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os05g07764.2	LOC_Os05g07764	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os07g10530.1	LOC_Os07g10530	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g38590.1	LOC_Os07g38590	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Len_g13261	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10359231g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_98970g0010	NIP1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g15033	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02179	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g04366	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g23219	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19342	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02975	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15943	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011724	No alias	not classified & original description: CDS=841-2229	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025098	No alias	not classified & original description: CDS=473-1768	0.04	OrthoFinder output from all 47 species
Sam_g00028	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26281	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52366	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52777	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo103932	No alias	No description available	0.05	OrthoFinder output from all 47 species
Smo438522	No alias	No description available	0.04	OrthoFinder output from all 47 species
Smo92536	No alias	No description available	0.03	OrthoFinder output from all 47 species
Solyc03g112620.4.1	Solyc03g112620	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc06g071590.3.1	Solyc06g071590	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc11g070080.1.1	Solyc11g070080	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc11g070090.1.1	Solyc11g070090	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Spa_g18887	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g22003	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g02012	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03907	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e006081_P001	Zm00001e006081	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e031210_P001	Zm00001e031210	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e033077_P002	Zm00001e033077	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010073	meristem maintenance	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010224	response to UV-B	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	HCCA
BP	GO:0000725	recombinational repair	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
MF	GO:0008381	mechanosensitive monoatomic ion channel activity	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009624	response to nematode	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
CC	GO:0009925	basal plasma membrane	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
BP	GO:0010338	leaf formation	IEP	HCCA
BP	GO:0010358	leaf shaping	IEP	HCCA
CC	GO:0010369	chromocenter	IEP	HCCA
MF	GO:0010385	double-stranded methylated DNA binding	IEP	HCCA
BP	GO:0010424	DNA methylation on cytosine within a CG sequence	IEP	HCCA
MF	GO:0010428	methyl-CpNpG binding	IEP	HCCA
MF	GO:0010429	methyl-CpNpN binding	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0016444	somatic cell DNA recombination	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
BP	GO:0016572	obsolete histone phosphorylation	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0031445	regulation of heterochromatin formation	IEP	HCCA
BP	GO:0031453	positive regulation of heterochromatin formation	IEP	HCCA
BP	GO:0031508	pericentric heterochromatin formation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032776	DNA methylation on cytosine	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
CC	GO:0045177	apical part of cell	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048532	anatomical structure arrangement	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048826	cotyledon morphogenesis	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0050982	detection of mechanical stimulus	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0090308	regulation of DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0090309	positive regulation of DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0120261	regulation of heterochromatin organization	IEP	HCCA
BP	GO:0120263	positive regulation of heterochromatin organization	IEP	HCCA
BP	GO:0140719	constitutive heterochromatin formation	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902275	regulation of chromatin organization	IEP	HCCA
BP	GO:1905269	positive regulation of chromatin organization	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA
BP	GO:2001252	positive regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025521	Neprosin_propep	55	177
IPR004314	Neprosin	190	412

External Links

No external refs found!

AT3G13510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation