Coexpression cluster: Cluster_99 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 5.79% (11/190) 1.85 0.000281 0.01558
GO:0006754 ATP biosynthetic process 1.58% (3/190) 4.05 0.000802 0.015868
GO:0015986 proton motive force-driven ATP synthesis 1.58% (3/190) 4.05 0.000802 0.015868
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.58% (3/190) 4.05 0.000802 0.015868
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.58% (3/190) 4.05 0.000802 0.015868
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.58% (3/190) 4.05 0.000802 0.015868
GO:0009142 nucleoside triphosphate biosynthetic process 1.58% (3/190) 4.05 0.000802 0.015868
GO:0006807 nitrogen compound metabolic process 11.58% (22/190) 1.17 0.000347 0.015997
GO:0019538 protein metabolic process 8.42% (16/190) 1.23 0.001461 0.016191
GO:1901576 organic substance biosynthetic process 6.32% (12/190) 1.48 0.001406 0.016224
GO:0044260 cellular macromolecule metabolic process 5.26% (10/190) 1.65 0.001523 0.01623
GO:0043226 organelle 5.26% (10/190) 1.67 0.001366 0.016456
GO:0044249 cellular biosynthetic process 6.32% (12/190) 1.56 0.000901 0.016641
GO:1901564 organonitrogen compound metabolic process 10.53% (20/190) 1.28 0.000242 0.016759
GO:0043229 intracellular organelle 5.26% (10/190) 1.67 0.001355 0.017059
GO:0046390 ribose phosphate biosynthetic process 1.58% (3/190) 3.82 0.001299 0.017133
GO:0009260 ribonucleotide biosynthetic process 1.58% (3/190) 3.82 0.001299 0.017133
GO:0009152 purine ribonucleotide biosynthetic process 1.58% (3/190) 3.82 0.001299 0.017133
GO:0008061 chitin binding 1.05% (2/190) 5.03 0.001703 0.017468
GO:0008233 peptidase activity 3.16% (6/190) 2.37 0.001181 0.018175
GO:0006508 proteolysis 3.16% (6/190) 2.23 0.001906 0.018201
GO:0005840 ribosome 4.21% (8/190) 1.85 0.001892 0.018719
GO:0009058 biosynthetic process 6.32% (12/190) 1.37 0.002641 0.018757
GO:0034641 cellular nitrogen compound metabolic process 6.84% (13/190) 1.45 0.001085 0.018787
GO:0043170 macromolecule metabolic process 10.0% (19/190) 1.13 0.001169 0.019056
GO:0043232 intracellular non-membrane-bounded organelle 4.21% (8/190) 1.77 0.002632 0.019187
GO:0043228 non-membrane-bounded organelle 4.21% (8/190) 1.77 0.002632 0.019187
GO:0009059 macromolecule biosynthetic process 4.74% (9/190) 1.63 0.002785 0.019283
GO:0043604 amide biosynthetic process 4.21% (8/190) 1.78 0.002511 0.019321
GO:0072522 purine-containing compound biosynthetic process 1.58% (3/190) 3.49 0.002489 0.019702
GO:0005575 cellular_component 10.0% (19/190) 1.04 0.002447 0.019933
GO:0071704 organic substance metabolic process 13.68% (26/190) 1.09 0.000217 0.019991
GO:0043043 peptide biosynthetic process 4.21% (8/190) 1.79 0.002441 0.020486
GO:0003735 structural constituent of ribosome 4.21% (8/190) 1.79 0.002417 0.020925
GO:1901293 nucleoside phosphate biosynthetic process 1.58% (3/190) 3.34 0.00333 0.020963
GO:0009165 nucleotide biosynthetic process 1.58% (3/190) 3.34 0.00333 0.020963
GO:0006518 peptide metabolic process 4.21% (8/190) 1.73 0.003106 0.020987
GO:0006412 translation 4.21% (8/190) 1.8 0.002349 0.020989
GO:0006164 purine nucleotide biosynthetic process 1.58% (3/190) 3.53 0.002302 0.021259
GO:0043603 amide metabolic process 4.21% (8/190) 1.71 0.003458 0.021285
GO:0034645 cellular macromolecule biosynthetic process 4.21% (8/190) 1.7 0.003613 0.021294
GO:1901137 carbohydrate derivative biosynthetic process 1.58% (3/190) 3.31 0.003564 0.021461
GO:0044238 primary metabolic process 12.63% (24/190) 1.06 0.000546 0.021612
GO:0005198 structural molecule activity 4.21% (8/190) 1.72 0.003308 0.021816
GO:0008237 metallopeptidase activity 1.58% (3/190) 3.27 0.003808 0.021974
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 1.05% (2/190) 4.41 0.003983 0.022515
GO:0008150 biological_process 18.95% (36/190) 0.79 0.000758 0.026231
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.05% (2/190) 4.26 0.00494 0.027369
GO:1901135 carbohydrate derivative metabolic process 2.11% (4/190) 2.54 0.005146 0.027949
GO:0008152 metabolic process 14.74% (28/190) 1.05 0.000208 0.028807
GO:0006027 glycosaminoglycan catabolic process 0.53% (1/190) 7.11 0.00721 0.03026
GO:0006313 transposition, DNA-mediated 0.53% (1/190) 7.11 0.00721 0.03026
GO:0032196 transposition 0.53% (1/190) 7.11 0.00721 0.03026
GO:0009253 peptidoglycan catabolic process 0.53% (1/190) 7.11 0.00721 0.03026
GO:0031110 regulation of microtubule polymerization or depolymerization 0.53% (1/190) 7.11 0.00721 0.03026
GO:0070507 regulation of microtubule cytoskeleton organization 0.53% (1/190) 7.11 0.00721 0.03026
GO:0009141 nucleoside triphosphate metabolic process 1.58% (3/190) 2.92 0.007539 0.03117
GO:0046034 ATP metabolic process 1.58% (3/190) 2.94 0.007169 0.033099
GO:0009199 ribonucleoside triphosphate metabolic process 1.58% (3/190) 2.94 0.007169 0.033099
GO:0009205 purine ribonucleoside triphosphate metabolic process 1.58% (3/190) 2.94 0.007169 0.033099
GO:0009144 purine nucleoside triphosphate metabolic process 1.58% (3/190) 2.94 0.007169 0.033099
GO:0034654 nucleobase-containing compound biosynthetic process 2.11% (4/190) 2.43 0.006819 0.03498
GO:0006334 nucleosome assembly 1.05% (2/190) 4.03 0.006746 0.035258
GO:0034728 nucleosome organization 1.05% (2/190) 4.03 0.006746 0.035258
GO:0071824 protein-DNA complex subunit organization 1.05% (2/190) 3.98 0.007138 0.035308
GO:0065004 protein-DNA complex assembly 1.05% (2/190) 3.98 0.007138 0.035308
GO:0044271 cellular nitrogen compound biosynthetic process 6.32% (12/190) 1.87 0.000128 0.035553
GO:0006338 chromatin remodeling 1.05% (2/190) 3.83 0.008806 0.035871
GO:0090407 organophosphate biosynthetic process 1.58% (3/190) 2.82 0.009131 0.036132
GO:0005509 calcium ion binding 2.11% (4/190) 2.31 0.009092 0.036499
GO:0006325 chromatin organization 1.05% (2/190) 3.76 0.009699 0.037839
GO:0032886 regulation of microtubule-based process 0.53% (1/190) 6.53 0.010796 0.04041
GO:0000270 peptidoglycan metabolic process 0.53% (1/190) 6.53 0.010796 0.04041
GO:0030203 glycosaminoglycan metabolic process 0.53% (1/190) 6.53 0.010796 0.04041
GO:0009150 purine ribonucleotide metabolic process 1.58% (3/190) 2.66 0.012107 0.043553
GO:0009259 ribonucleotide metabolic process 1.58% (3/190) 2.66 0.012107 0.043553
GO:0019693 ribose phosphate metabolic process 1.58% (3/190) 2.66 0.012107 0.043553
GO:0000413 protein peptidyl-prolyl isomerization 1.05% (2/190) 3.5 0.01365 0.047263
GO:0018208 peptidyl-proline modification 1.05% (2/190) 3.5 0.01365 0.047263
GO:0061783 peptidoglycan muralytic activity 0.53% (1/190) 6.11 0.014368 0.047952
GO:0003796 lysozyme activity 0.53% (1/190) 6.11 0.014368 0.047952
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 1.05% (2/190) 3.44 0.014729 0.048001
GO:0004222 metalloendopeptidase activity 1.05% (2/190) 3.44 0.014729 0.048001
GO:0019438 aromatic compound biosynthetic process 2.11% (4/190) 2.12 0.014065 0.048097
GO:0003674 molecular_function 26.84% (51/190) 0.43 0.013555 0.048137
GO:0018130 heterocycle biosynthetic process 2.11% (4/190) 2.09 0.015 0.048313
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_38 0.015 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_54 0.033 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_81 0.023 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_135 0.031 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_136 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_157 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_164 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_192 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_59 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_66 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_103 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_189 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_212 0.015 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_179 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_59 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_166 0.032 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_172 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_91 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_96 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_194 0.022 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_103 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_109 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_181 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_196 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_213 0.039 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_124 0.02 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_50 0.04 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_59 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_80 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_92 0.032 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_105 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_134 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_166 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_188 0.019 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_48 0.019 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_98 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_73 0.025 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_74 0.026 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_66 0.029 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_236 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_53 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_243 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_80 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_63 0.033 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_67 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_99 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_102 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_121 0.035 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_157 0.03 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_160 0.057 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_163 0.021 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_169 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_177 0.034 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_181 0.064 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_189 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_194 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_197 0.03 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_275 0.038 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_302 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_32 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_46 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_48 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_60 0.033 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_78 0.028 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_81 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_92 0.027 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_115 0.018 OrthoFinder output from all 47 species Compare
Sequences (190) (download table)

InterPro Domains

GO Terms

Family Terms