Coexpression cluster: Cluster_189 (HCCA)

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Average Expression Profile



Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005575 cellular_component 23.17% (19/82) 1.99 0.0 6.1e-05
GO:0110165 cellular anatomical entity 18.29% (15/82) 1.92 8e-06 0.001251
GO:1902494 catalytic complex 6.1% (5/82) 3.94 2.1e-05 0.002081
GO:0043603 amide metabolic process 9.76% (8/82) 2.29 0.000239 0.002882
GO:0008150 biological_process 26.83% (22/82) 1.14 0.000238 0.002995
GO:0010646 regulation of cell communication 2.44% (2/82) 6.5 0.00023 0.003017
GO:0023051 regulation of signaling 2.44% (2/82) 6.5 0.00023 0.003017
GO:0006518 peptide metabolic process 9.76% (8/82) 2.32 0.000204 0.00308
GO:0140535 intracellular protein-containing complex 3.66% (3/82) 4.79 0.000186 0.003113
GO:0005198 structural molecule activity 9.76% (8/82) 2.31 0.000221 0.003182
GO:0005509 calcium ion binding 4.88% (4/82) 3.81 0.000202 0.003211
GO:0044271 cellular nitrogen compound biosynthetic process 10.98% (9/82) 2.16 0.000184 0.003273
GO:0031967 organelle envelope 2.44% (2/82) 7.39 6.6e-05 0.003346
GO:0031975 envelope 2.44% (2/82) 7.39 6.6e-05 0.003346
GO:0005740 mitochondrial envelope 2.44% (2/82) 7.39 6.6e-05 0.003346
GO:0043604 amide biosynthetic process 9.76% (8/82) 2.35 0.000178 0.003366
GO:0003735 structural constituent of ribosome 9.76% (8/82) 2.36 0.000175 0.003523
GO:0034645 cellular macromolecule biosynthetic process 9.76% (8/82) 2.24 0.000305 0.00354
GO:0043043 peptide biosynthetic process 9.76% (8/82) 2.36 0.000174 0.003744
GO:0043228 non-membrane-bounded organelle 9.76% (8/82) 2.38 0.000156 0.003934
GO:0043232 intracellular non-membrane-bounded organelle 9.76% (8/82) 2.38 0.000156 0.003934
GO:0006412 translation 9.76% (8/82) 2.36 0.00017 0.003945
GO:1901566 organonitrogen compound biosynthetic process 10.98% (9/82) 2.22 0.000136 0.004114
GO:0005840 ribosome 9.76% (8/82) 2.42 0.000132 0.004416
GO:0043226 organelle 10.98% (9/82) 2.25 0.000118 0.004469
GO:0043229 intracellular organelle 10.98% (9/82) 2.25 0.000118 0.005095
GO:0032991 protein-containing complex 7.32% (6/82) 2.61 0.000465 0.005203
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 2.44% (2/82) 5.91 0.000528 0.005697
GO:0098800 inner mitochondrial membrane protein complex 3.66% (3/82) 4.18 0.00064 0.006446
GO:0009059 macromolecule biosynthetic process 9.76% (8/82) 2.08 0.000625 0.006506
GO:0044249 cellular biosynthetic process 10.98% (9/82) 1.88 0.000755 0.007358
GO:0098798 mitochondrial protein-containing complex 3.66% (3/82) 4.08 0.000783 0.007392
GO:0045277 respiratory chain complex IV 2.44% (2/82) 5.55 0.000868 0.007709
GO:0005751 mitochondrial respiratory chain complex IV 2.44% (2/82) 5.55 0.000868 0.007709
GO:0044260 cellular macromolecule metabolic process 9.76% (8/82) 1.99 0.000942 0.008131
GO:0005839 proteasome core complex 2.44% (2/82) 5.37 0.001111 0.009317
GO:1901576 organic substance biosynthetic process 10.98% (9/82) 1.8 0.001145 0.009346
GO:0090231 regulation of spindle checkpoint 1.22% (1/82) 9.05 0.001887 0.010555
GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint 1.22% (1/82) 9.05 0.001887 0.010555
GO:0010942 positive regulation of cell death 1.22% (1/82) 9.05 0.001887 0.010555
GO:0010941 regulation of cell death 1.22% (1/82) 9.05 0.001887 0.010555
GO:0042981 regulation of apoptotic process 1.22% (1/82) 9.05 0.001887 0.010555
GO:0043065 positive regulation of apoptotic process 1.22% (1/82) 9.05 0.001887 0.010555
GO:0043067 regulation of programmed cell death 1.22% (1/82) 9.05 0.001887 0.010555
GO:0043068 positive regulation of programmed cell death 1.22% (1/82) 9.05 0.001887 0.010555
GO:1901976 regulation of cell cycle checkpoint 1.22% (1/82) 9.05 0.001887 0.010555
GO:1903504 regulation of mitotic spindle checkpoint 1.22% (1/82) 9.05 0.001887 0.010555
GO:0034641 cellular nitrogen compound metabolic process 10.98% (9/82) 1.75 0.001419 0.010711
GO:0065007 biological regulation 7.32% (6/82) 2.31 0.001388 0.010746
GO:0048522 positive regulation of cellular process 2.44% (2/82) 5.21 0.001382 0.010986
GO:0019538 protein metabolic process 12.2% (10/82) 1.62 0.001505 0.011087
GO:0008152 metabolic process 18.29% (15/82) 1.19 0.002058 0.011299
GO:0051983 regulation of chromosome segregation 1.22% (1/82) 7.83 0.004398 0.011754
GO:1904062 regulation of monoatomic cation transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:1903818 positive regulation of voltage-gated potassium channel activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:1901379 regulation of potassium ion transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:1901018 positive regulation of potassium ion transmembrane transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:1901016 regulation of potassium ion transmembrane transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0099177 regulation of trans-synaptic signaling 1.22% (1/82) 7.83 0.004398 0.011754
GO:1904064 positive regulation of cation transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:2001257 regulation of cation channel activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:2001259 positive regulation of cation channel activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0007346 regulation of mitotic cell cycle 1.22% (1/82) 7.83 0.004398 0.011754
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.22% (1/82) 7.83 0.004398 0.011754
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.22% (1/82) 7.83 0.004398 0.011754
GO:0033044 regulation of chromosome organization 1.22% (1/82) 7.83 0.004398 0.011754
GO:0032411 positive regulation of transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0033045 regulation of sister chromatid segregation 1.22% (1/82) 7.83 0.004398 0.011754
GO:1901990 regulation of mitotic cell cycle phase transition 1.22% (1/82) 7.83 0.004398 0.011754
GO:1901381 positive regulation of potassium ion transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0043269 regulation of monoatomic ion transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0043268 positive regulation of potassium ion transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0010959 regulation of metal ion transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0032409 regulation of transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0043266 regulation of potassium ion transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0034767 positive regulation of monoatomic ion transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0034765 regulation of monoatomic ion transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0022898 regulation of transmembrane transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0043270 positive regulation of monoatomic ion transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0032222 regulation of synaptic transmission, cholinergic 1.22% (1/82) 7.83 0.004398 0.011754
GO:0051050 positive regulation of transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0051049 regulation of transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0050804 modulation of chemical synaptic transmission 1.22% (1/82) 7.83 0.004398 0.011754
GO:0034764 positive regulation of transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0032414 positive regulation of ion transmembrane transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0032412 regulation of monoatomic ion transmembrane transporter activity 1.22% (1/82) 7.83 0.004398 0.011754
GO:0032879 regulation of localization 1.22% (1/82) 7.83 0.004398 0.011754
GO:0034762 regulation of transmembrane transport 1.22% (1/82) 7.83 0.004398 0.011754
GO:0030431 sleep 1.22% (1/82) 7.83 0.004398 0.011754
GO:0015980 energy derivation by oxidation of organic compounds 2.44% (2/82) 4.35 0.004444 0.011772
GO:0009058 biosynthetic process 10.98% (9/82) 1.71 0.001705 0.012263
GO:0048518 positive regulation of biological process 2.44% (2/82) 5.03 0.001753 0.012312
GO:0031461 cullin-RING ubiquitin ligase complex 1.22% (1/82) 7.63 0.005025 0.012752
GO:0000151 ubiquitin ligase complex 1.22% (1/82) 7.63 0.005025 0.012752
GO:0000152 nuclear ubiquitin ligase complex 1.22% (1/82) 7.63 0.005025 0.012752
GO:0005680 anaphase-promoting complex 1.22% (1/82) 7.63 0.005025 0.012752
GO:1901564 organonitrogen compound metabolic process 13.41% (11/82) 1.48 0.001861 0.012775
GO:0046872 metal ion binding 7.32% (6/82) 1.93 0.004966 0.013041
GO:0043169 cation binding 7.32% (6/82) 1.91 0.005367 0.013508
GO:0009060 aerobic respiration 2.44% (2/82) 4.71 0.002707 0.013855
GO:0045333 cellular respiration 2.44% (2/82) 4.71 0.002707 0.013855
GO:0003674 molecular_function 35.37% (29/82) 0.72 0.002705 0.014334
GO:0019646 aerobic electron transport chain 2.44% (2/82) 4.73 0.002663 0.014362
GO:0007088 regulation of mitotic nuclear division 1.22% (1/82) 8.31 0.003143 0.014605
GO:0010965 regulation of mitotic sister chromatid separation 1.22% (1/82) 8.31 0.003143 0.014605
GO:0033047 regulation of mitotic sister chromatid segregation 1.22% (1/82) 8.31 0.003143 0.014605
GO:0051783 regulation of nuclear division 1.22% (1/82) 8.31 0.003143 0.014605
GO:1905818 regulation of chromosome separation 1.22% (1/82) 8.31 0.003143 0.014605
GO:0070069 cytochrome complex 2.44% (2/82) 4.59 0.003209 0.014684
GO:0034204 lipid translocation 1.22% (1/82) 8.05 0.003771 0.014985
GO:0017121 plasma membrane phospholipid scrambling 1.22% (1/82) 8.05 0.003771 0.014985
GO:0045332 phospholipid translocation 1.22% (1/82) 8.05 0.003771 0.014985
GO:0097035 regulation of membrane lipid distribution 1.22% (1/82) 8.05 0.003771 0.014985
GO:0007009 plasma membrane organization 1.22% (1/82) 8.05 0.003771 0.014985
GO:0140303 intramembrane lipid transporter activity 1.22% (1/82) 8.05 0.003771 0.014985
GO:0017128 phospholipid scramblase activity 1.22% (1/82) 8.05 0.003771 0.014985
GO:0050794 regulation of cellular process 6.1% (5/82) 2.12 0.006071 0.015028
GO:0071704 organic substance metabolic process 15.85% (13/82) 1.13 0.006066 0.015141
GO:0005548 phospholipid transporter activity 1.22% (1/82) 7.31 0.006277 0.015166
GO:0015914 phospholipid transport 1.22% (1/82) 7.31 0.006277 0.015166
GO:0006807 nitrogen compound metabolic process 13.41% (11/82) 1.25 0.006231 0.015299
GO:0022904 respiratory electron transport chain 2.44% (2/82) 4.61 0.003115 0.015678
GO:0022900 electron transport chain 2.44% (2/82) 4.5 0.0036 0.016226
GO:0050789 regulation of biological process 6.1% (5/82) 2.08 0.006812 0.016327
GO:0044238 primary metabolic process 15.85% (13/82) 1.21 0.003761 0.016463
GO:0098803 respiratory chain complex 2.44% (2/82) 4.47 0.003752 0.016662
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.22% (1/82) 7.05 0.007528 0.017901
GO:0043170 macromolecule metabolic process 12.2% (10/82) 1.28 0.007852 0.018525
GO:0048038 quinone binding 1.22% (1/82) 6.93 0.008153 0.018652
GO:1902531 regulation of intracellular signal transduction 1.22% (1/82) 6.93 0.008153 0.018652
GO:1901987 regulation of cell cycle phase transition 1.22% (1/82) 6.93 0.008153 0.018652
GO:0044237 cellular metabolic process 13.41% (11/82) 1.2 0.008224 0.018675
GO:0051603 proteolysis involved in protein catabolic process 2.44% (2/82) 3.9 0.008109 0.018984
GO:0005094 Rho GDP-dissociation inhibitor activity 1.22% (1/82) 6.83 0.008777 0.019348
GO:0007265 Ras protein signal transduction 1.22% (1/82) 6.83 0.008777 0.019348
GO:0007266 Rho protein signal transduction 1.22% (1/82) 6.83 0.008777 0.019348
GO:0098796 membrane protein complex 3.66% (3/82) 2.84 0.008736 0.019688
GO:0009987 cellular process 17.07% (14/82) 0.99 0.009634 0.021083
GO:0010564 regulation of cell cycle process 1.22% (1/82) 6.63 0.010025 0.021625
GO:0015748 organophosphate ester transport 1.22% (1/82) 6.63 0.010025 0.021625
GO:0033043 regulation of organelle organization 1.22% (1/82) 6.39 0.011893 0.025474
GO:0044093 positive regulation of molecular function 1.22% (1/82) 6.31 0.012515 0.026617
GO:0065008 regulation of biological quality 1.22% (1/82) 6.05 0.015 0.031678
GO:0005488 binding 20.73% (17/82) 0.79 0.016504 0.034613
GO:0043248 proteasome assembly 1.22% (1/82) 5.88 0.016859 0.035114
GO:0006091 generation of precursor metabolites and energy 2.44% (2/82) 3.33 0.017248 0.035677
GO:0009966 regulation of signal transduction 1.22% (1/82) 5.83 0.017478 0.035908
GO:0005092 GDP-dissociation inhibitor activity 1.22% (1/82) 5.78 0.018097 0.036927
GO:0007264 small GTPase mediated signal transduction 1.22% (1/82) 5.73 0.018715 0.037679
GO:0061024 membrane organization 1.22% (1/82) 5.73 0.018715 0.037679
GO:0008061 chitin binding 1.22% (1/82) 5.59 0.020567 0.041135
GO:0005319 lipid transporter activity 1.22% (1/82) 5.42 0.023032 0.045462
GO:0032501 multicellular organismal process 1.22% (1/82) 5.42 0.023032 0.045462
GO:0048583 regulation of response to stimulus 1.22% (1/82) 5.39 0.023647 0.046373
GO:0006869 lipid transport 1.22% (1/82) 5.28 0.02549 0.049665
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_5 0.044 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_93 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_168 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_211 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_224 0.035 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_269 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_335 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_344 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_384 0.028 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_94 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_22 0.02 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_30 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_55 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_149 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_195 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_261 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_343 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_25 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_126 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_156 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_179 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_198 0.034 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_233 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_46 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_198 0.056 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_200 0.017 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.016 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_168 0.033 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_72 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_128 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_99 0.023 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_103 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_41 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_42 0.034 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_161 0.024 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_68 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_73 0.025 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_159 0.021 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_25 0.019 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_233 0.035 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_176 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_487 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_343 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_154 0.025 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_209 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_82 0.016 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_108 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_10 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_38 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_87 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_160 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_452 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_10 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_28 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_48 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_53 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_56 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_67 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_69 0.023 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_74 0.025 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_76 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_78 0.035 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_85 0.031 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_88 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_89 0.024 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_179 0.022 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_129 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_101 0.027 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_102 0.025 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_115 0.027 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_123 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_143 0.041 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_162 0.022 OrthoFinder output from all 47 species Compare
Sequences (82) (download table)



InterPro Domains



GO Terms



Family Terms