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  5. Cba_g14008

Cba_g14008


Description : lipoamide-containing component *(H-protein) of glycine cleavage system & original description: none


Gene families : OG0002114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14008
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00054540 evm_27.TU.AmTr_v1... Photosynthesis.photorespiration.glycine cleavage... 0.1 OrthoFinder output from all 47 species
AT1G32470 No alias Single hybrid motif superfamily protein 0.08 OrthoFinder output from all 47 species
AT2G35370 GDCH glycine decarboxylase complex H 0.1 OrthoFinder output from all 47 species
Adi_g019861 No alias lipoamide-containing component *(H-protein) of glycine... 0.12 OrthoFinder output from all 47 species
Adi_g094450 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g102943 No alias lipoamide-containing component *(H-protein) of glycine... 0.11 OrthoFinder output from all 47 species
Aev_g23460 No alias lipoamide-containing component *(H-protein) of glycine... 0.08 OrthoFinder output from all 47 species
Ala_g16182 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Als_g00184 No alias lipoamide-containing component *(H-protein) of glycine... 0.12 OrthoFinder output from all 47 species
Aob_g05607 GDCH lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Aop_g01914 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Azfi_s0093.g043340 No alias lipoamide-containing component *(H-protein) of glycine... 0.05 OrthoFinder output from all 47 species
Ceric.01G108100.1 Ceric.01G108100 lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
Ceric.26G032600.1 Ceric.26G032600 lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Cre06.g253350 No alias Photosynthesis.photorespiration.glycine cleavage... 0.02 OrthoFinder output from all 47 species
Dac_g00295 No alias lipoamide-containing component *(H-protein) of glycine... 0.05 OrthoFinder output from all 47 species
Dcu_g46571 No alias lipoamide-containing component *(H-protein) of glycine... 0.09 OrthoFinder output from all 47 species
Dde_g02618 No alias lipoamide-containing component *(H-protein) of glycine... 0.14 OrthoFinder output from all 47 species
Ehy_g00941 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
GSVIVT01012063001 No alias Photosynthesis.photorespiration.glycine cleavage... 0.02 OrthoFinder output from all 47 species
GSVIVT01013175001 No alias Photosynthesis.photorespiration.glycine cleavage... 0.08 OrthoFinder output from all 47 species
Gb_37034 GDCH lipoamide-containing component H-protein of glycine... 0.08 OrthoFinder output from all 47 species
LOC_Os10g37180.1 LOC_Os10g37180 lipoamide-containing component H-protein of glycine... 0.07 OrthoFinder output from all 47 species
Len_g25183 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Lfl_g02714 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
MA_20265g0010 No alias lipoamide-containing component H-protein of glycine... 0.06 OrthoFinder output from all 47 species
Mp3g05780.1 No alias lipoamide-containing component H-protein of glycine... 0.1 OrthoFinder output from all 47 species
Msp_g00128 No alias lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Nbi_g01783 No alias lipoamide-containing component *(H-protein) of glycine... 0.08 OrthoFinder output from all 47 species
Ore_g40804 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
Pir_g02729 No alias lipoamide-containing component *(H-protein) of glycine... 0.09 OrthoFinder output from all 47 species
Pp3c19_11600V3.1 Pp3c19_11600 Single hybrid motif superfamily protein 0.05 OrthoFinder output from all 47 species
Ppi_g08906 No alias lipoamide-containing component *(H-protein) of glycine... 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006297 No alias lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Smo113331 No alias Photosynthesis.photorespiration.glycine cleavage... 0.06 OrthoFinder output from all 47 species
Solyc02g068740.3.1 Solyc02g068740 lipoamide-containing component H-protein of glycine... 0.03 OrthoFinder output from all 47 species
Solyc06g061070.3.1 Solyc06g061070 lipoamide-containing component H-protein of glycine... 0.05 OrthoFinder output from all 47 species
Solyc08g007040.3.1 GDCH, Solyc08g007040 lipoamide-containing component H-protein of glycine... 0.04 OrthoFinder output from all 47 species
Spa_g12562 No alias lipoamide-containing component *(H-protein) of glycine... 0.09 OrthoFinder output from all 47 species
Spa_g12563 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Spa_g14635 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Spa_g21862 No alias lipoamide-containing component *(H-protein) of glycine... 0.05 OrthoFinder output from all 47 species
Tin_g09642 No alias lipoamide-containing component *(H-protein) of glycine... 0.08 OrthoFinder output from all 47 species
Zm00001e039579_P001 GDCH, Zm00001e039579 lipoamide-containing component H-protein of glycine... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR033753 GCV_H/Fam206 99 218
No external refs found!