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  5. Sam_g17042

Sam_g17042


Description : phosphatase *(PPH1/TAP38) & original description: none


Gene families : OG0006074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17042

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00152490 TAP38, PPH1,... Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
AT4G27800 TAP38, PPH1 thylakoid-associated phosphatase 38 0.06 OrthoFinder output from all 47 species
Adi_g108888 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g12075 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g03798 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03696 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g04768 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21016.t1 TAP38, PPH1,... phosphatase *(PPH1/TAP38) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67880 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.22G079500.1 TAP38, PPH1,... phosphatase *(PPH1/TAP38) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g05668 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10853 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g06065 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01038572001 TAP38, PPH1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
LOC_Os01g37130.1 TAP38, PPH1,... photosynthetic acclimation PPH1/TAP38 phosphatase 0.03 OrthoFinder output from all 47 species
Len_g10295 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11522 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
MA_10427903g0010 TAP38, PPH1 Protein phosphatase 2C 57 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_53012g0010 TAP38, PPH1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_74291g0010 TAP38, PPH1 Probable protein phosphatase 2C 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp6g19810.1 TAP38, PPH1 photosynthetic acclimation PPH1/TAP38 phosphatase 0.04 OrthoFinder output from all 47 species
Nbi_g10658 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g05862 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g00856 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011446 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: CDS=171-1448 0.03 OrthoFinder output from all 47 species
Smo233392 TAP38, PPH1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc03g082960.2.1 TAP38, PPH1,... photosynthetic acclimation PPH1/TAP38 phosphatase 0.04 OrthoFinder output from all 47 species
Spa_g15006 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06521 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e020739_P001 TAP38, PPH1,... photosynthetic acclimation PPH1/TAP38 phosphatase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 100 375
No external refs found!