1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g20671

Lfl_g20671


Description : not classified & original description: none


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g20671

Target Alias Description ECC score Gene Family Method Actions
Adi_g032808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035043001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_69352g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g30639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g040730.1.1 Solyc07g040730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g062810.1.1 Solyc08g062810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e001392_P001 Zm00001e001392 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e017498_P001 Zm00001e017498 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 79 122
No external refs found!