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  5. Dde_g21620

Dde_g21620 (PSB27)


Aliases : PSB27

Description : protein involved in PS-II assembly *(Psb27) & original description: none


Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21620
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT1G03600 PSB27 photosystem II family protein 0.08 OrthoFinder output from all 47 species
Adi_g017378 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Adi_g017379 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Ala_g03684 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
Aob_g03856 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Aop_g01610 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene05705.t1 PSB27, Aspi01Gene05705 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075849 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Ceric.35G049900.1 PSB27, Ceric.35G049900 protein involved in PS-II assembly *(Psb27) & original... 0.09 OrthoFinder output from all 47 species
Cre05.g243800 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g02601 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g44405 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g19278 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g20883 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01030552001 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Gb_23437 PSB27 Psb27 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
LOC_Os03g21560.1 PSB27, LOC_Os03g21560 Psb27 protein involved in PS-II assembly 0.12 OrthoFinder output from all 47 species
Len_g11187 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.12 OrthoFinder output from all 47 species
MA_388691g0010 PSB27 Psb27 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Mp3g19780.1 PSB27 Psb27 protein involved in PS-II assembly 0.11 OrthoFinder output from all 47 species
Msp_g04977 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.09 OrthoFinder output from all 47 species
Nbi_g03338 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Pir_g09257 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.11 OrthoFinder output from all 47 species
Smo77713 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc07g054290.1.1 PSB27, Solyc07g054290 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Spa_g04006 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Spa_g04007 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.08 OrthoFinder output from all 47 species
Spa_g05331 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Spa_g05332 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
Tin_g00234 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e001572_P001 PSB27, Zm00001e001572 Psb27 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Zm00001e038249_P001 PSB27, Zm00001e038249 Psb27 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0010206 photosystem II repair IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 64 193
No external refs found!