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  5. Dde_g08307

Dde_g08307 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g08307

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00109730 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.02 OrthoFinder output from all 47 species
AMTR_s00060p00116070 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.1 OrthoFinder output from all 47 species
AT5G35630 GS2, ATGSL1, GLN2 glutamine synthetase 2 0.15 OrthoFinder output from all 47 species
Als_g09560 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Aob_g04960 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g10805 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53323.t1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0092.g043135 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g08502 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.08 OrthoFinder output from all 47 species
Ceric.26G044000.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.14 OrthoFinder output from all 47 species
Ceric.35G023400.1 GLN1.3, ATGSKB6,... not classified & original description: pacid=50581571... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.42 GLN1.3, ATGSKB6, GLN1;3 Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
Dac_g05010 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.09 OrthoFinder output from all 47 species
Dac_g05074 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01008483001 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.05 OrthoFinder output from all 47 species
GSVIVT01017868001 GS2, ATGSL1, GLN2 Nutrient uptake.nitrogen assimilation.ammonium... 0.1 OrthoFinder output from all 47 species
Gb_03066 GS2, ATGSL1, GLN2 cytosolic glutamine synthetase (GLN1). plastidial... 0.02 OrthoFinder output from all 47 species
LOC_Os04g56400.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.06 OrthoFinder output from all 47 species
Len_g16696 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Lfl_g07274 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Lfl_g12475 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
MA_9199701g0010 ATGSR1, GLN1;1,... Glutamine synthetase cytosolic isozyme OS=Pinus... 0.02 OrthoFinder output from all 47 species
Mp1g24330.1 GLN1.3, ATGSKB6, GLN1;3 Glutamine synthetase, chloroplastic OS=Chlamydomonas... 0.15 OrthoFinder output from all 47 species
Mp3g09300.1 GLN1.3, ATGSKB6, GLN1;3 Glutamine synthetase PR-1 OS=Phaseolus vulgaris... 0.01 OrthoFinder output from all 47 species
Msp_g09593 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06665 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g17432 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Pir_g01435 GLN1;4 cytosolic glutamine synthetase *(GLN1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g13405 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.07 OrthoFinder output from all 47 species
Pir_g59187 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.06 OrthoFinder output from all 47 species
Ppi_g09418 ATGSR2, GLN1;2, GSR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31945 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026481 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g16445 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.07 OrthoFinder output from all 47 species
Smo270944 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
Solyc01g080280.3.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.12 OrthoFinder output from all 47 species
Tin_g12121 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR008147 Gln_synt_N 22 96
IPR008146 Gln_synth_cat_dom 123 253
No external refs found!