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  5. Dde_g06832

Dde_g06832


Description : translation elongation factor *(EF-G) & original description: none


Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246330 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT1G45332 No alias Translation elongation factor EFG/EF2 protein 0.04 OrthoFinder output from all 47 species
Ala_g02375 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02449 No alias translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g03037 No alias translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01018186001 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
LOC_Os03g36780.1 LOC_Os03g36780 EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Len_g11584 No alias translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g02343 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.02 OrthoFinder output from all 47 species
Mp1g01140.1 No alias EF-G translation elongation factor 0.04 OrthoFinder output from all 47 species
Ore_g06853 No alias translation elongation factor *(EF-G) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g090690.4.1 Solyc01g090690 EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Spa_g50183 No alias translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006345_P003 Zm00001e006345 EF-G translation elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041095 EFG_II 447 521
IPR004161 EFTu-like_2 368 434
IPR005517 Transl_elong_EFG/EF2_IV 522 643
IPR000640 EFG_V-like 646 731
IPR000795 T_Tr_GTP-bd_dom 53 326
No external refs found!