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  5. Aop_g37559

Aop_g37559 (PLSP1)


Aliases : PLSP1

Description : plastidic signal peptidase *(PLSP/TPP) & original description: none


Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g37559
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Ala_g01598 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Aob_g01408 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50615.t2 PLSP1, Aspi01Gene50615 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Cre07.g344350 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.02 OrthoFinder output from all 47 species
Dac_g44630 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g43765 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.07 OrthoFinder output from all 47 species
LOC_Os02g16709.1 PLSP1, LOC_Os02g16709 plastidic signal peptidase (PLSP/TPP) 0.03 OrthoFinder output from all 47 species
Nbi_g08086 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.05 OrthoFinder output from all 47 species
Ore_g19818 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Pir_g11136 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Pir_g19089 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g19357 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.05 OrthoFinder output from all 47 species
Smo47339 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.04 OrthoFinder output from all 47 species
Solyc12g007120.2.1 PLSP1, Solyc12g007120 plastidic signal peptidase (PLSP/TPP) 0.02 OrthoFinder output from all 47 species
Tin_g30631 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e034327_P001 Zm00001e034327 plastidic signal peptidase (PLSP/TPP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006465 signal peptide processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR019533 Peptidase_S26 159 315
No external refs found!