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  5. Lfl_g12211

Lfl_g12211 (cpHsc70-1)


Aliases : cpHsc70-1

Description : chaperone *(cpHsc70)) & original description: none


Gene families : OG0000341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12211

Target Alias Description ECC score Gene Family Method Actions
AT4G24280 cpHsc70-1 chloroplast heat shock protein 70-1 0.01 OrthoFinder output from all 47 species
AT5G49910 CPHSC70-2EAT... chloroplast heat shock protein 70-2 0.01 OrthoFinder output from all 47 species
Adi_g113249 cpHsc70-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g113250 cpHsc70-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33603 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008005 cpHsc70-1 chaperone *(cpHsc70)) & original description: CDS=241-2397 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030878 cpHsc70-1 not classified & original description: CDS=418-2490 0.02 OrthoFinder output from all 47 species
Ceric.36G024300.1 cpHsc70-1,... chaperone *(cpHsc70)) & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g535700 CPHSC70-2EAT... Heat shock 70 kDa protein 7, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g06384 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Dde_g08447 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008331001 cpHsc70-1 Stromal 70 kDa heat shock-related protein, chloroplastic... 0.04 OrthoFinder output from all 47 species
GSVIVT01038517001 HSC70-5, MTHSC70-2 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
LOC_Os05g23740.1 cpHsc70-1, LOC_Os05g23740 chaperone (cpHsc70) 0.04 OrthoFinder output from all 47 species
MA_2041g0020 CPHSC70-2EAT... Stromal 70 kDa heat shock-related protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_6445935g0010 CPHSC70-2EAT... Stromal 70 kDa heat shock-related protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp8g07330.1 HSC70-5, MTHSC70-2 chaperone HSCA of mitochondrial ISC system transfer... 0.02 OrthoFinder output from all 47 species
Mp8g13310.1 cpHsc70-1 chaperone (cpHsc70) 0.02 OrthoFinder output from all 47 species
Ore_g07288 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13552 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c26_10600V3.1 cpHsc70-1, Pp3c26_10600 chloroplast heat shock protein 70-2 0.01 OrthoFinder output from all 47 species
Pp3c7_15200V3.1 cpHsc70-1, Pp3c7_15200 chloroplast heat shock protein 70-2 0.01 OrthoFinder output from all 47 species
Ppi_g29497 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004368 cpHsc70-1 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Smo267815 cpHsc70-1 External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Solyc01g103450.3.1 cpHsc70-1, Solyc01g103450 chaperone (cpHsc70) 0.04 OrthoFinder output from all 47 species
Spa_g23150 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52505 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56377 cpHsc70-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005333_P001 cpHsc70-1, Zm00001e005333 chaperone (cpHsc70) 0.02 OrthoFinder output from all 47 species
Zm00001e017846_P002 cpHsc70-1, Zm00001e017846 chaperone (cpHsc70) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 78 618
No external refs found!